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13_1_40cm_2_scaffold_2404

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2404_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(149..526)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon W5-61a RepID=H9BX82_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_2404_2
unknown

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comp(578..841)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_3
unknown

Not on your lists

comp(1000..1494)
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_4
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2062..3672)
DNA (1611bp) protein (537aa)
malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
malate synthase (EC:2.3.3.9)
Malate synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEG2_9CHLR
13_1_40cm_2_scaffold_2404_5
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4162..4953)
DNA (792bp) protein (264aa)
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:AIG24449.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AIG24449.1};; TaxID=1042163 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="
Isocitrate lyase n=1 Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TSP9_BRELA
13_1_40cm_2_scaffold_2404_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5087..6478)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_2404_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(6900..7424)
DNA (525bp) protein (175aa)
Thiol-disulfide isomerase or thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZNT6_MELRP
thiol-disulfide isomerase or thioredoxin Tax=RBG_16_Archaea_50_20_curated
thioredoxin-like protein
13_1_40cm_2_scaffold_2404_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7537..8250
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7A9_GEODF
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein
13_1_40cm_2_scaffold_2404_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8271..9185)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
peroxiredoxin Tax=RBG_16_Archaea_50_20_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_40cm_2_scaffold_2404_10
unknown

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9272..9508
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_11
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(9805..11088)
DNA (1284bp) protein (428aa)
Putative arsenical pump membrane protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT6_NITGG
arsB; arsenical pump membrane protein Tax=RBG_16_Thaumarchaeota_49_8_curated
Na+/H+ antiporter NhaD-like permease
13_1_40cm_2_scaffold_2404_12
unknown

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comp(11174..11566)
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_13
unknown

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comp(12127..12441)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_14
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12574..13065)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ANY9_THEM3
hypothetical protein Tax=RBG_16_Bathyarchaeota_57_9_curated
hypothetical protein
13_1_40cm_2_scaffold_2404_15
unknown

Not on your lists

13200..13517
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_16
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(13576..14736)
DNA (1161bp) protein (387aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase {ECO:0000313|EMBL:BAJ64016.1}; EC=4.2.3.1 {ECO:0000313|EMBL:BAJ64016.1};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;"
Threonine synthase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N6F2_ANATU
13_1_40cm_2_scaffold_2404_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

14814..15161
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=Q8U0V5_PYRFU
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
transcriptional regulator, PadR-like family
13_1_40cm_2_scaffold_2404_18
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(15168..15737)
DNA (570bp) protein (190aa)
Putative hydrocarbon binding protein (Contains V4R domain) n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMB0_ACIS0
putative hydrocarbon binding protein (contains V4R domain)
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:AGB04946.1}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-3
13_1_40cm_2_scaffold_2404_19
unknown

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comp(15834..16523)
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_20
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16647..16961
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RSG0_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF85705.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
hypothetical protein
13_1_40cm_2_scaffold_2404_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17004..18320
DNA (1317bp) protein (439aa)
beta-lactamase n=1 Tax=Candidatus Nitrosoarchaeum limnia RepID=UPI00026CE38F
metallo-beta-lactamase superfamily hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
RNA-metabolising metallo-beta-lactamase
13_1_40cm_2_scaffold_2404_22
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18372..18869
DNA (498bp) protein (166aa)
GNAT family acetyltransferase n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B3411C
GCN5 family acetyltransferase
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EZP77492.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
13_1_40cm_2_scaffold_2404_23
unknown

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comp(19024..19215)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_24
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(19379..20086)
DNA (708bp) protein (236aa)
type 12 methyltransferase Tax=RBG_16_KB1_OP1_55_9_curated
Methyltransferase type 11 id=5799920 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
type 12 methyltransferase
13_1_40cm_2_scaffold_2404_25
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

Not on your lists

comp(20136..20759)
DNA (624bp) protein (208aa)
Metal-sulfur cluster biosynthetic enzyme n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RZ10_CENSY
metal-sulfur cluster biosynthetic enzyme
Metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:ABK78577.1}; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarchaeum.;" source="Cenarchaeum symbiosum (stra
13_1_40cm_2_scaffold_2404_26
unknown

Not on your lists

21149..21472
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_2404_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21561..22070
DNA (510bp) protein (170aa)
Luciferase-like monooxygenase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHT3_NITGG
luciferase-like monooxygenase family protein
Luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AFU59500.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" so
Displaying 27 items

View Taxonomy