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13_1_40cm_2_scaffold_283

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_283_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2..499)
DNA (498bp) protein (166aa)
Restriction endonuclease family protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_2_scaffold_283_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(480..1688)
DNA (1209bp) protein (403aa)
Membrane-associated Zn-dependent protease n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RY87_CENSY
peptidase M50 Tax=RBG_16_Archaea_50_20_curated
membrane-associated Zn-dependent protease
13_1_40cm_2_scaffold_283_3
RBG_16_Archaea_50_20_curated, Archaea

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1821..2330
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037434A1
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_1_40cm_2_scaffold_283_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2572..2871)
DNA (300bp) protein (100aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-directed RNA polymerase subunit K n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=RPOK_THEPD
RNA polymerase Rpb6
13_1_40cm_2_scaffold_283_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2861..4510)
DNA (1650bp) protein (550aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome Tax=RBG_13_Bathyarchaeota_46_16b_curated
ths; archaeal thermosome
13_1_40cm_2_scaffold_283_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5120..6241
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_2_scaffold_283_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6248..6634
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein; K09143 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_283_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(6631..6972)
DNA (342bp) protein (114aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_2_scaffold_283_9

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7095..7247
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI000366BD75
Marine sediment metagenome DNA, contig: S01H1_L07576 {ECO:0000313|EMBL:GAF74111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcriptional regulator
13_1_40cm_2_scaffold_283_10
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(7254..8030)
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037C0072
13_1_40cm_2_scaffold_283_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(8027..9157)
DNA (1131bp) protein (377aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
ino; myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5T3_KORCO
13_1_40cm_2_scaffold_283_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(9157..10341)
DNA (1185bp) protein (395aa)
Carboxypeptidase n=2 Tax=Thermoplasma volcanium RepID=Q97AQ8_THEVO
metal-dependent carboxypeptidase Tax=RBG_16_Archaea_50_20_curated
metal-dependent carboxypeptidase
13_1_40cm_2_scaffold_283_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(10408..11157)
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5X6_9CHLR
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_283_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(11162..13765)
DNA (2604bp) protein (868aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_40cm_2_scaffold_283_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

14056..15321
DNA (1266bp) protein (422aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
16S rRNA methyltransferase n=1 Tax=Geobacillus sp. JF8 RepID=S5Z3B5_9BACI
16S rRNA methyltransferase
13_1_40cm_2_scaffold_283_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15329..15940)
DNA (612bp) protein (204aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_40cm_2_scaffold_283_17
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(16350..16610)
DNA (261bp) protein (87aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RBG_16_Chloroflexi_64_32_curated
dioxygenase, ferredoxin subunit id=53939 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
iron-sulfur protein
13_1_40cm_2_scaffold_283_18
unknown

Not on your lists

comp(16640..16828)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_283_19
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17189..17320
DNA (132bp) protein (44aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 19 items

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