ggKbase home page

13_1_40cm_2_scaffold_7171

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7171_1
unknown

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_7171_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(263..739)
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70505.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
13_1_40cm_2_scaffold_7171_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1335..2318)
DNA (984bp) protein (328aa)
Histone deacetylase superfamily n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFG1_THET1
histone deacetylase superfamily protein; K04768 acetoin utilization protein AcuC Tax=RBG_16_Archaea_50_20_curated
histone deacetylase superfamily protein
13_1_40cm_2_scaffold_7171_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2490..2831)
DNA (342bp) protein (114aa)
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AIF83239.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AIF83239.1};; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitr
Aldehyde dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYT2_9ARCH
13_1_40cm_2_scaffold_7171_5

Not on your lists

comp(2849..3628)
DNA (780bp) protein (260aa)
Aldehyde dehydrogenase (GabD) {ECO:0000313|EMBL:AIF08618.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AIF08618.1};; Flags: Fragment;; TaxID=1456121 species="Archaea; Thaumarchaeota; environmental samples.;" sour
gabD; putative succinate-semialdehyde dehydrogenase (EC:1.2.1.79)
Aldehyde dehydrogenase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KLI6_9ARCH
13_1_40cm_2_scaffold_7171_6
Pyrobaculum neutrophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(4161..5435)
DNA (1275bp) protein (425aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YAR1_PYRNV
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB39140.1}; TaxID=444157 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum neu
13_1_40cm_2_scaffold_7171_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

5742..6218
DNA (477bp) protein (159aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_7171_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

6322..7011
DNA (690bp) protein (230aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_7171_9
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

7028..7654
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAJ3_METSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ10065.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
13_1_40cm_2_scaffold_7171_10
unknown

Not on your lists

7666..8256
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_2_scaffold_7171_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8275..8892
DNA (618bp) protein (206aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG32_ROSCS
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABU56419.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus
13_1_40cm_2_scaffold_7171_12
unknown

Not on your lists

comp(8893..9501)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_40cm_2_scaffold_7171_13
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9566..10318
DNA (753bp) protein (251aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ABC81798.1}; EC=1.1.1.274 {ECO:0000313|EMBL:ABC81798.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobac
2,5-didehydrogluconate reductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJG8_ANADE
Displaying 13 items

View Taxonomy