ggKbase home page

13_1_40cm_2_scaffold_1980

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1980_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1..3021
DNA (3021bp) protein (1007aa)
Aminopeptidase N n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIM3_CHLTF
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AEP11921.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;
13_1_40cm_2_scaffold_1980_2
unknown

Not on your lists

comp(3045..4283)
DNA (1239bp) protein (413aa)

This feature has no annotations

13_1_40cm_2_scaffold_1980_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4595..5098
DNA (504bp) protein (168aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein id=12556929 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
conserved hypothetical protein
13_1_40cm_2_scaffold_1980_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5215..6252
DNA (1038bp) protein (346aa)
id=12556930 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
id=14425142 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
13_1_40cm_2_scaffold_1980_5
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6314..8161
DNA (1848bp) protein (616aa)
GTP-binding protein TypA n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VX97_THESW rbh
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AFK87142.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaero
13_1_40cm_2_scaffold_1980_6
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8161..8982
DNA (822bp) protein (274aa)
ugpQ; glycerophosphodiester phosphodiesterase, cytosolic; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=GWC2_Pelobacteraceae_58_13_curated
putative glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphoryl diester phosphodiesterase YhdW n=1 Tax=Paenibacillus sp. P22 RepID=T2LTU4_9BACL
13_1_40cm_2_scaffold_1980_7
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..11023
DNA (1719bp) protein (573aa)
sulfate adenylyltransferase n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225B2C0
Sulfate adenylyltransferase {ECO:0000313|EMBL:KGF32578.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis
sulfate adenyltransferase
13_1_40cm_2_scaffold_1980_8
unknown

Not on your lists

comp(11028..11357)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_2_scaffold_1980_9
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

11608..12111
DNA (504bp) protein (168aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
hypothetical protein id=14624045 bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_2_scaffold_1980_10
RLO_PLX_64_10, Bacteria

Not on your lists

12330..13634
DNA (1305bp) protein (435aa)
Glycosyl transferase family 2 n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VML7_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
glycosyl transferase family 2
13_1_40cm_2_scaffold_1980_11
unknown

Not on your lists

13802..14275
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_2_scaffold_1980_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14426..15241)
DNA (816bp) protein (272aa)
Transport-associated protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2A9_ACISM id=5223475 bin=16ft_combo_ws3_JS1 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
phophoslipid binding protein
13_1_40cm_2_scaffold_1980_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15350..15958)
DNA (609bp) protein (203aa)
putative periplasmic or secreted lipoprotein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_1980_14
unknown

Not on your lists

16436..16528
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 14 items

View Taxonomy