ggKbase home page

13_1_40cm_2_scaffold_21063

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_21063_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28..1122)
DNA (1095bp) protein (365aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase
13_1_40cm_2_scaffold_21063_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1124..1642)
DNA (519bp) protein (173aa)
ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RBG_16_Anaeromyxobacter_69_14_curated
ATP synthase subunit b n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ATPF_ANADF
ATP synthase F0 subunit B
13_1_40cm_2_scaffold_21063_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1656..1886)
DNA (231bp) protein (77aa)
ATP synthase subunit c n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFS1_RHOMR
ATP synthase subunit c
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
13_1_40cm_2_scaffold_21063_4
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1903..2730)
DNA (828bp) protein (276aa)
ATP synthase subunit a n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z310_MELRP
F0F1 ATP synthase subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
13_1_40cm_2_scaffold_21063_5
unknown

Not on your lists

comp(2727..3110)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_2_scaffold_21063_6

Not on your lists

comp(3107..3349)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL14253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_21063_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3393..4916)
DNA (1524bp) protein (508aa)
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3) id=14429496 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoN; NADH-quinone oxidoreductase subunit N (NADH dehydrogenase I, chain N) (NDH-1, chain N) (EC:1.6.99.5 1.6.5.3)
13_1_40cm_2_scaffold_21063_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4913..6565)
DNA (1653bp) protein (551aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF6_9BACT rbh
13_1_40cm_2_scaffold_21063_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6583..8115)
DNA (1533bp) protein (511aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14623692 bin=bin5_DeltaP species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
nuoL; NADH dehydrogenase I subunit L
Displaying 9 items

View Taxonomy