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13_1_40cm_2_scaffold_2963

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2963_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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96..1622
DNA (1527bp) protein (509aa)
acsL1; protein AcsL1 (EC:6.2.1.3) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
AMP-binding enzyme id=4412384 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
13_1_40cm_2_scaffold_2963_2
RLO_RIF02_62_27, RIF2, Bacteria

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comp(1615..3597)
DNA (1983bp) protein (661aa)
helicase c2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
ATP-dependent helicase, DinG family protein id=4841274 bin=GWA2_Elusi-like_A8_64_40 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
helicase c2
13_1_40cm_2_scaffold_2963_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(3605..4450)
DNA (846bp) protein (282aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein id=14426198 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_2_scaffold_2963_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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4532..5686
DNA (1155bp) protein (385aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBD1_DESAA
arabinose efflux permease family protein Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
major facilitator superfamily protein
13_1_40cm_2_scaffold_2963_5
RLO_PLX_64_10, Bacteria

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5716..6573
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000364657B
periplasmic solute-binding protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
periplasmic solute-binding protein
13_1_40cm_2_scaffold_2963_6
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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6570..7574
DNA (1005bp) protein (335aa)
Aminomethyltransferase {ECO:0000313|EMBL:ABQ92062.1}; EC=2.1.2.10 {ECO:0000313|EMBL:ABQ92062.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexac
Aminomethyltransferase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZK9_ROSS1
glycine cleavage T protein (aminomethyl transferase)
13_1_40cm_2_scaffold_2963_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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7571..7975
DNA (405bp) protein (135aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQ89_KYRT2
cobalamin (vitamin B12) biosynthesis CbiX protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
cobalamin (vitamin B12) biosynthesis CbiX protein
13_1_40cm_2_scaffold_2963_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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8085..9062
DNA (978bp) protein (326aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Thioredoxin reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC7_9BACT
13_1_40cm_2_scaffold_2963_9
unknown

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9090..9263
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_2_scaffold_2963_trna_1
unknown

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comp(9277..9359)
DNA (83bp)
transferRNA
13_1_40cm_2_scaffold_2963_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9392..9793)
DNA (402bp) protein (134aa)
Protein translocase subunit secG n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RN5_SOLUE
protein translocase subunit SecG
Protein translocase subunit secG {ECO:0000313|EMBL:ABJ87685.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
13_1_40cm_2_scaffold_2963_11
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9854..10621)
DNA (768bp) protein (256aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=14430402 bin=bin3_NC10 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
triosephosphate isomerase (EC:5.3.1.1)
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_40cm_2_scaffold_2963_12
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10618..10878)
DNA (261bp) protein (87aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=349161 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0T0_DESRM
Displaying 13 items

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