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13_1_40cm_2_scaffold_29891

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_29891_1
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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2..496
DNA (495bp) protein (165aa)
UPI0003D7A02C related cluster id=8266421 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
TPR repeat domain-containing protein
13_1_40cm_2_scaffold_29891_2
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(569..1177)
DNA (609bp) protein (203aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] Tax=RBG_16_Desulfobacca_58_9_curated
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI0003632819
phosphoheptose isomerase
13_1_40cm_2_scaffold_29891_3
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1179..1931)
DNA (753bp) protein (251aa)
Multi-copper polyphenol oxidoreductase, laccase n=2 Tax=Odoribacter RepID=F9Z7P5_ODOSD
Multi-copper polyphenol oxidoreductase, laccase
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Od
13_1_40cm_2_scaffold_29891_4
bacterium UASB14, Bacteria

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2108..2380
DNA (273bp) protein (91aa)
Preprotein translocase, YajC subunit n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S5S0_PROA2
YajC protein {ECO:0000313|EMBL:GAK52079.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
preprotein translocase subunit YajC
13_1_40cm_2_scaffold_29891_5

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2388..3986
DNA (1599bp) protein (533aa)
Preprotein translocase subunit SecD n=1 Tax=uncultured prokaryote RepID=H5SKX1_9ZZZZ
Preprotein translocase subunit SecD {ECO:0000313|EMBL:BAL56807.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
protein-export membrane protein SecD rbh
13_1_40cm_2_scaffold_29891_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3995..5185
DNA (1191bp) protein (397aa)
Protein-export membrane protein SecF n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9I3_ACIC5
secF; protein-export membrane protein SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium cap
13_1_40cm_2_scaffold_29891_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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5379..7526
DNA (2148bp) protein (716aa)
(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE
(p)ppGpp synthetase SpoT/RelA
13_1_40cm_2_scaffold_29891_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7566..7949
DNA (384bp) protein (128aa)
endoribonuclease L-PSP; K07567 TdcF protein Tax=GWF2_Verrucomicrobia_62_7_curated
endoribonuclease L-PSP
putative endoribonuclease L-PSP; K07567 TdcF protein id=14630800 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
13_1_40cm_2_scaffold_29891_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7969..8187)
DNA (219bp) protein (73aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12556580 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L28
13_1_40cm_2_scaffold_29891_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8440..9504
DNA (1065bp) protein (355aa)
Type IV pilus assembly protein PilM n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIR7_CHLTF
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RBG_16_Acidobacteria_70_10_curated
type IV pilus assembly protein PilM
13_1_40cm_2_scaffold_29891_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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9501..10109
DNA (609bp) protein (203aa)
Type IV pilus assembly protein PilN n=1 Tax=uncultured prokaryote RepID=H5SKW6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KDA52992.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
13_1_40cm_2_scaffold_29891_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10119..10592
DNA (474bp) protein (158aa)
Type IV pilus assembly protein PilO n=1 Tax=uncultured prokaryote RepID=H5SKW5_9ZZZZ
Pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
Displaying 12 items

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