ggKbase home page

13_1_20cm_2_scaffold_1075

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1075_1

Not on your lists

2..2482
DNA (2481bp) protein (827aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025B2_SOLUE
Permease {ECO:0000313|EMBL:AHZ45619.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_20cm_2_scaffold_1075_2
unknown

Not on your lists

comp(2614..3318)
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_20cm_2_scaffold_1075_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3506..6523
DNA (3018bp) protein (1006aa)
Putative Cna B-type protein n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6579..9047)
DNA (2469bp) protein (823aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000371F00F rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9143..10270)
DNA (1128bp) protein (376aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV1_SOLUE
NHL repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NHL repeat-containing protein
13_1_20cm_2_scaffold_1075_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10281..11339)
DNA (1059bp) protein (353aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV2_SOLUE
NHL repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NHL repeat-containing protein
13_1_20cm_2_scaffold_1075_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11502..13325)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y891_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13529..14791)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y628_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(14943..15614)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y0L4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15611..17344)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y0L4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(17561..18163)
DNA (603bp) protein (201aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADK9_9GAMM
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_20cm_2_scaffold_1075_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(18164..19564)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00037B3C99
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_1075_13
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(19606..20541)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ24_HALO1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(20538..21287)
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAW8_SPHTD
F420-dependent oxidoreductase {ECO:0000313|EMBL:ACZ39915.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
F420-dependent oxidoreductase
13_1_20cm_2_scaffold_1075_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21394..21789)
DNA (396bp) protein (132aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J348_9RHOB
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PPOX class F420-dependent enzyme
13_1_20cm_2_scaffold_1075_16
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(21867..22550)
DNA (684bp) protein (228aa)
F420-dependent NADP reductase n=1 Tax=Patulibacter americanus RepID=UPI0003B5048B
dinucleotide-binding protein; K06988 Tax=RBG_16_Archaea_50_20_curated
NADPH-dependent F420 reductase
13_1_20cm_2_scaffold_1075_17
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22570..22926
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002D466E9
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1075_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23047..23673
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031A45B4
Transglutaminase {ECO:0000313|EMBL:AIR49540.1}; Transglutaminase domain-containing protein {ECO:0000313|EMBL:EFV87239.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
transglutaminase
13_1_20cm_2_scaffold_1075_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

23803..25926
DNA (2124bp) protein (708aa)
pyrrolo-quinoline quinone; K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Y3_SOLUE rbh
pyrrolo-quinoline quinone
13_1_20cm_2_scaffold_1075_20
unknown

Not on your lists

comp(26079..26720)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_20cm_2_scaffold_1075_21
unknown

Not on your lists

comp(26717..26845)
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_20cm_2_scaffold_1075_22

Not on your lists

26857..27672
DNA (816bp) protein (272aa)
Short-chain dehydrogenase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0IEM5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKL66052.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_1075_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(27650..28798)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024H6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
Displaying 23 items

View Taxonomy