ggKbase home page

13_1_20cm_2_scaffold_1288

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1288_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..840)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003778119
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1288_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1035..2012)
DNA (978bp) protein (326aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJZ3_9BACT
NADPH:quinone oxidoreductase family protein
13_1_20cm_2_scaffold_1288_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2177..3403
DNA (1227bp) protein (409aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRR5_SIDLE
13_1_20cm_2_scaffold_1288_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3474..5300
DNA (1827bp) protein (609aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJB5_9BACT
13_1_20cm_2_scaffold_1288_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5389..5808)
DNA (420bp) protein (140aa)
ApaG domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V41_SOLUE
apaG; ApaG protein; K06195 ApaG protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
apaG; ApaG protein
13_1_20cm_2_scaffold_1288_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5821..6888)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000375A0B4
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG89177.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_2_scaffold_1288_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7066..9105
DNA (2040bp) protein (680aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_2
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE alias=16ft_combo_ws3_scaffold_1918_6 id=5224304 tax=16ft_combo_ws3 species=Aquifex aeolicus (strain VF5) genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae
13_1_20cm_2_scaffold_1288_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

9258..9656
DNA (399bp) protein (133aa)
ferredoxin n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B42830
(2Fe-2S) ferredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
(2Fe-2S) ferredoxin
13_1_20cm_2_scaffold_1288_9
unknown

Not on your lists

comp(10099..10248)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_2_scaffold_1288_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10698..11087
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PE9_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ88471.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
Displaying 10 items

View Taxonomy