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13_1_20cm_2_scaffold_1333

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1333_1
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..938)
DNA (936bp) protein (312aa)
Fosmidomycin resistance protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A8E2_BURGB
Fosmidomycin resistance protein Fsr {ECO:0000313|EMBL:AJK46059.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
fsr; fosmidomycin resistance protein Fsr
13_1_20cm_2_scaffold_1333_2
Acidobacteriaceae bacterium KBS 83, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1040..1531
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000366B99A
13_1_20cm_2_scaffold_1333_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1686..2300
DNA (615bp) protein (205aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFA7_TERRK
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Acidobacteria_70_10_curated
sigma-70 family RNA polymerase sigma factor
13_1_20cm_2_scaffold_1333_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2297..3058
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037680F8
Uncharacterized protein {ECO:0000313|EMBL:CDM65321.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
anti-sigma K factor RskA
13_1_20cm_2_scaffold_1333_5
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3125..3559)
DNA (435bp) protein (145aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMY4_ANADE
Putative periplasmic serine endoprotease DegP-like {ECO:0000313|EMBL:GAO03915.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterinea
peptidase S1 and S6, chymotrypsin/Hap
13_1_20cm_2_scaffold_1333_6
unknown

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3801..4331
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_20cm_2_scaffold_1333_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4395..5720
DNA (1326bp) protein (442aa)
Outer membrane efflux protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SJ3_SOLUE
Outer membrane efflux protein {ECO:0000313|EMBL:ABJ87377.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
outer membrane efflux protein
13_1_20cm_2_scaffold_1333_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5717..6880
DNA (1164bp) protein (388aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SJ2_SOLUE rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABJ87378.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus S
RND family efflux transporter MFP subunit
13_1_20cm_2_scaffold_1333_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

6881..9961
DNA (3081bp) protein (1027aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SJ1_SOLUE rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ABJ87379.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solib
CzcA family heavy metal efflux protein
13_1_20cm_2_scaffold_1333_10
unknown

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9958..10410
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_2_scaffold_1333_11
unknown

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10635..10832
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_2_scaffold_1333_12
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10829..11692
DNA (864bp) protein (288aa)
Oxidoreductase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RQ0_SYMTH rbh
Oxidoreductase {ECO:0000313|EMBL:BAD39643.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain
oxidoreductase
13_1_20cm_2_scaffold_1333_13
unknown

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comp(11743..12051)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_20cm_2_scaffold_1333_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12060..12308)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XE69_9BACT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_1333_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12592..13383
DNA (792bp) protein (264aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7W7_9CYAN
CarD family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
CarD family transcriptional regulator
13_1_20cm_2_scaffold_1333_16
unknown

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comp(13408..13689)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_2_scaffold_1333_17
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13993..14349
DNA (357bp) protein (119aa)
Response regulator receiver domain protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWB5_9BACL
Chemotaxis protein CheY {ECO:0000313|EMBL:KEO79743.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymy
response regulator
13_1_20cm_2_scaffold_1333_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14449..15648
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U8_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ83478.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
hypothetical protein
Displaying 18 items

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