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13_1_20cm_2_scaffold_1390

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1390_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..461)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBA0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG91330.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_2_scaffold_1390_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(536..709)
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_20cm_2_scaffold_1390_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

928..1449
DNA (522bp) protein (174aa)
Methyltransferase type 11 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XNS7_STAC7
Methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RNA methyltransferase
13_1_20cm_2_scaffold_1390_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1519..1956
DNA (438bp) protein (146aa)
Response regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XNY9_SORCE
Response regulator {ECO:0000313|EMBL:AGP32368.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellul
response regulator
13_1_20cm_2_scaffold_1390_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2078..2593)
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Bordetella bronchiseptica RepID=K4QPQ6_BORBO
PF04463 family protein {ECO:0000313|EMBL:KCV59001.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisept
hypothetical protein
13_1_20cm_2_scaffold_1390_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2756..3478)
DNA (723bp) protein (241aa)
Putative Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX5_9BACT
Haloacid dehalogenase-like hydrolase domain-containing protein 3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Haloacid dehalogenase-like hydrolase domain-containing protein 3
13_1_20cm_2_scaffold_1390_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3653..4480
DNA (828bp) protein (276aa)
Thioredoxin-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJM3_KORVE
redoxin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
thioredoxin-like protein
13_1_20cm_2_scaffold_1390_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4488..5117)
DNA (630bp) protein (210aa)
Response regulator receiver protein n=1 Tax=uncultured bacterium RepID=K1XP84_9BACT
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
response regulator receiver protein
13_1_20cm_2_scaffold_1390_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5195..7762
DNA (2568bp) protein (856aa)
PAS domain S-box n=1 Tax=Schlesneria paludicola RepID=UPI00029A8E5C
signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PAS domain-containing protein
13_1_20cm_2_scaffold_1390_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7907..8668
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00037F51C8
PAS domain S-box Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PAS domain-containing protein
13_1_20cm_2_scaffold_1390_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8723..8929
DNA (207bp) protein (69aa)
CsbD family protein n=1 Tax=Variovorax paradoxus RepID=UPI000362F03C
CsbD family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
csbd family protein
13_1_20cm_2_scaffold_1390_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9177..10103
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWU6_9GAMM
diguanylate cyclase/phosphodiesterase with FHA and GAF sensor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
diguanylate cyclase
13_1_20cm_2_scaffold_1390_trna_1
unknown

Not on your lists

10181..10252
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_1390_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10377..11522
DNA (1146bp) protein (382aa)
Secretion protein HlyD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IDT3_ANADE
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
secretion protein HlyD
13_1_20cm_2_scaffold_1390_14
unknown

Not on your lists

11581..11829
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_2_scaffold_1390_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11834..14203)
DNA (2370bp) protein (790aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_2_scaffold_1390_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14264..15328)
DNA (1065bp) protein (355aa)
General secretion pathway protein A n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEK4_METPP
peptidoglycan-binding domain-containing protein; K02450 general secretion pathway protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gspA; general secretion pathway protein A
13_1_20cm_2_scaffold_1390_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16136..16744
DNA (609bp) protein (203aa)
GCN5-related N-acetyltransferase n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3EE02_GEOS4
acetyltransferase, ribosomal protein N-acetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Acetyltransferase
13_1_20cm_2_scaffold_1390_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16764..18044
DNA (1281bp) protein (427aa)
Putative metal-dependent phosphohydrolase n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NME4_9BACT
diguanylate cyclase (GGDEF) domain Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative metal-dependent phosphohydrolase
Displaying 19 items

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