ggKbase home page

13_1_20cm_2_scaffold_2043

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2043_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..2947)
DNA (2946bp) protein (982aa)
TonB-dependent receptor n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8T0_TERSS
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
TonB-dependent receptor
13_1_20cm_2_scaffold_2043_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3179..4288)
DNA (1110bp) protein (370aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=Q84CV0_9BACT
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2043_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4453..5631)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YRN1_BURA4 rbh
13_1_20cm_2_scaffold_2043_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5655..7526
DNA (1872bp) protein (624aa)
putative hybrid histidine kinase (EC:2.7.13.3)
Putative Hybrid histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBG3_9BACT rbh
PAS domain S-box Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2043_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7523..8749
DNA (1227bp) protein (409aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICE3_BORPD rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
13_1_20cm_2_scaffold_2043_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9065..9616
DNA (552bp) protein (184aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q160J4_ROSDO
short chain dehydrogenase family protein 2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2043_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9731..10789)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E3C317
cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cyclase
13_1_20cm_2_scaffold_2043_8
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

10832..11056
DNA (225bp) protein (75aa)
MbtH domain protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP51_9BACT
MbtH domain protein {ECO:0000313|EMBL:EHO42166.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
balhimycin biosynthetic protein MbtH
13_1_20cm_2_scaffold_2043_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11053..11850
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037BB768
aldolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
aldolase
13_1_20cm_2_scaffold_2043_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11847..12191
DNA (345bp) protein (115aa)
putative quinone oxidoreductase (Cryz), zinc-binding (EC:1.-.-.-)
NADPH:quinone oxidoreductase n=1 Tax=Spirosoma panaciterrae RepID=UPI000378F05D
NADPH:quinone reductase, zeta-crystallin-like oxidoreductase protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
13_1_20cm_2_scaffold_2043_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12185..12760
DNA (576bp) protein (192aa)
NADPH:quinone oxidoreductase (EC:1.6.5.5)
NADPH:quinone oxidoreductase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LLH8_RALME
NADPH:quinone reductase, zeta-crystallin-like oxidoreductase protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
13_1_20cm_2_scaffold_2043_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12771..13139)
DNA (369bp) protein (123aa)
DNA polymerase, beta domain protein region n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1K0_ROSS1
DNA polymerase subunit beta Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
DNA polymerase subunit beta
13_1_20cm_2_scaffold_2043_13
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(13078..13344)
DNA (267bp) protein (89aa)
Putative HEPN domain n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2T5_THERP
Putative HEPN domain {ECO:0000313|EMBL:ACM05585.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 2
putative HEPN domain
13_1_20cm_2_scaffold_2043_14
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13596..15182
DNA (1587bp) protein (529aa)
Tannase and feruloyl esterase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3G2_TERSS rbh
Tannase and feruloyl esterase {ECO:0000313|EMBL:ADV83575.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus s
tannase and feruloyl esterase
13_1_20cm_2_scaffold_2043_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15200..16195
DNA (996bp) protein (332aa)
alpha/beta hydrolase fold protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Alpha/beta hydrolase fold-containing protein n=2 Tax=Chloroflexus RepID=A9WG90_CHLAA rbh
alpha/beta hydrolase fold-containing protein
13_1_20cm_2_scaffold_2043_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16329..17225)
DNA (897bp) protein (299aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025N4_SOLUE
Amino acid permease-associated region {ECO:0000313|EMBL:AHG88670.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
amino acid permease-associated region
13_1_20cm_2_scaffold_2043_17
unknown

Not on your lists

17904..18107
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_2043_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18244..19551
DNA (1308bp) protein (436aa)
Rhomboid-like protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51F3
rhomboid-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
rhomboid-like protein
13_1_20cm_2_scaffold_2043_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(19545..20198)
DNA (654bp) protein (218aa)
Amino acid-binding ACT n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV43_RUBXD
amino acid-binding protein; K06862 energy-converting hydrogenase B subunit Q Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
amino acid-binding protein
13_1_20cm_2_scaffold_2043_20
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20203..20547)
DNA (345bp) protein (115aa)
UPF0145 protein Acid_4599 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Y4599_SOLUE
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
hypothetical protein
13_1_20cm_2_scaffold_2043_21
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20560..21357)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Halomonas stevensii RepID=UPI0002F1F2B4 rbh
2-haloalkanoic acid dehalogenase, type II Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
haloacid dehalogenase
13_1_20cm_2_scaffold_2043_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21395..21838)
DNA (444bp) protein (148aa)
Est22 n=1 Tax=uncultured bacterium RepID=S5Y3D1_9BACT
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Beta-lactamase
13_1_20cm_2_scaffold_2043_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21832..22158)
DNA (327bp) protein (109aa)
alcohol dehydrogenase zinc-binding domain-containing protein; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_
Putative zinc-containing alcohol dehydrogenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VPK1_9ACTO
molecular chaperone GroES
Displaying 23 items

View Taxonomy