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13_1_20cm_2_scaffold_2232

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2232_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2..505)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCZ4_SINAD
dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
dehydrogenase
13_1_20cm_2_scaffold_2232_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(651..1802)
DNA (1152bp) protein (384aa)
formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
CoA transferase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UHH9_9BURK
formyl-CoA transferase
13_1_20cm_2_scaffold_2232_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1857..2069
DNA (213bp) protein (71aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21PM5_SACD2
peptidase C60, sortase A and B
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_2232_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2169..2894
DNA (726bp) protein (242aa)
AhpC/TSA family protein n=1 Tax=uncultured bacterium FLS18 RepID=C6G412_9BACT
AhpC/TSA family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
AhpC/TSA family protein
13_1_20cm_2_scaffold_2232_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3046..3756)
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCA3_9BACT
TetR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
TetR family transcriptional regulator
13_1_20cm_2_scaffold_2232_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3753..4865)
DNA (1113bp) protein (371aa)
ABC multidrug efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS5_KORVE
ABC multidrug efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ABC multidrug efflux pump, inner membrane subunit
13_1_20cm_2_scaffold_2232_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4944..5933)
DNA (990bp) protein (330aa)
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS4_KORVE
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
daunorubicin resistance ABC transporter ATPase subunit
13_1_20cm_2_scaffold_2232_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(6065..7105)
DNA (1041bp) protein (347aa)
Secretion protein HlyD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHS3_KORVE
secretion protein HlyD; K01993 HlyD family secretion protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
secretion protein HlyD
13_1_20cm_2_scaffold_2232_9
unknown

Not on your lists

comp(7267..7935)
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_20cm_2_scaffold_2232_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7932..9146)
DNA (1215bp) protein (405aa)
Ca2+-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_2232_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9277..11427
DNA (2151bp) protein (717aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase n=2 Tax=Singulisphaera acidiphila RepID=L0DEV8_SINAD
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:AGA27216.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetace
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_1_20cm_2_scaffold_2232_12
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

11408..12130
DNA (723bp) protein (241aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Beggiatoa sp. PS RepID=A7BPL1_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_2232_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12127..12729
DNA (603bp) protein (201aa)
sugar isomerase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379A3EC
Sugar isomerase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Sugar isomerase family protein
13_1_20cm_2_scaffold_2232_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

12726..13265
DNA (540bp) protein (180aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="u
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X334_9BACT
phosphatase
13_1_20cm_2_scaffold_2232_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13262..13999
DNA (738bp) protein (246aa)
tal; transaldolase (EC:2.2.1.2) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
tal; transaldolase (EC:2.2.1.2)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038196D1
13_1_20cm_2_scaffold_2232_16
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

13996..15501
DNA (1506bp) protein (502aa)
ADP-heptose synthase (EC:2.7.-.-)
ADP-heptose synthase n=1 Tax=Anabaena sp. 90 RepID=K7WC58_9NOST
ADP-heptose synthase Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
13_1_20cm_2_scaffold_2232_17
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15501..16439
DNA (939bp) protein (313aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Herbaspirillum sp. CF444 RepID=J3CZG7_9BURK rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL81421.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbasp
NAD-dependent epimerase/dehydratase
13_1_20cm_2_scaffold_2232_18
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16533..17201
DNA (669bp) protein (223aa)
UDP-galactopyranose mutase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z8A0_9PROT
UDP-galactopyranose mutase {ECO:0000313|EMBL:EME70535.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
UDP-galactopyranose mutase
Displaying 18 items

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