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13_1_20cm_2_scaffold_3836

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3836_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..367)
-----------------
DNA (366bp)
protein (122aa)
CoA-binding domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQF0_9BACT
CoA-binding protein; K06929 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_3836_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(448..1614)
-----------------
DNA (1167bp)
protein (389aa)
L-aspartate aminotransferase apoenzyme (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
L-aspartate aminotransferase (EC:2.6.1.1)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q067_9FIRM
13_1_20cm_2_scaffold_3836_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1781..2275)
-----------------
DNA (495bp)
protein (165aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q84_SOLUE
13_1_20cm_2_scaffold_3836_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2263..2742)
-----------------
DNA (480bp)
protein (160aa)
Methyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CK37_DESK7
putative methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
methyltransferase
13_1_20cm_2_scaffold_3836_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2900..5005)
-----------------
DNA (2106bp)
protein (702aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA helicase RecG n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX8_KORVE
ATP-dependent DNA helicase RecG
13_1_20cm_2_scaffold_3836_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5002..5592)
-----------------
DNA (591bp)
protein (197aa)
id=12556231 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_3836_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5615..6145)
-----------------
DNA (531bp)
protein (177aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_3836_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6190..6450)
-----------------
DNA (261bp)
protein (87aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EY64_9BACT
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
13_1_20cm_2_scaffold_3836_9
unknown

Not on your lists

comp(6447..6569)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

13_1_20cm_2_scaffold_3836_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6642..7595)
-----------------
DNA (954bp)
protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822614
ribokinase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ribokinase-like domain-containing protein
13_1_20cm_2_scaffold_3836_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7687..8295
-----------------
DNA (609bp)
protein (203aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U3_GEMAT
13_1_20cm_2_scaffold_3836_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8339..8668
-----------------
DNA (330bp)
protein (110aa)
id=12557026 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_3836_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8665..9456
-----------------
DNA (792bp)
protein (264aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CZN4_9BACL
13_1_20cm_2_scaffold_3836_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9453..9857
-----------------
DNA (405bp)
protein (135aa)
Zn-dependent protease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B404C8
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Zn-dependent protease
13_1_20cm_2_scaffold_3836_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


9844..10785
-----------------
DNA (942bp)
protein (314aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL17 RepID=UPI000369EE14
dimethyladenosine transferase
13_1_20cm_2_scaffold_3836_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11059..12711
-----------------
DNA (1653bp)
protein (551aa)
beta-lactamase-like; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Y18_SOLUE
beta-lactamase domain-containing protein
13_1_20cm_2_scaffold_3836_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12715..13608
-----------------
DNA (894bp)
protein (298aa)
FtsK/SpoIIIE domain protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A6V1_PELCD
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
FtsK/SpoIIIE domain-containing protein
Displaying 17 items

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