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13_1_20cm_2_scaffold_4320

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4320_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..614)
DNA (612bp) protein (204aa)
thrB; homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YZ8_CYTH3
13_1_20cm_2_scaffold_4320_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(892..1914)
DNA (1023bp) protein (341aa)
L-threonine 3-dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7N3_9DELT rbh
putative L-threonine dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative L-threonine dehydrogenase
13_1_20cm_2_scaffold_4320_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1898..2773)
DNA (876bp) protein (292aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9B4_GEMAT
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39091.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
hypothetical membrane protein
13_1_20cm_2_scaffold_4320_4
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2832..3749)
DNA (918bp) protein (306aa)
Family 3 extracellular solute-binding protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EYH6_9NOCA rbh
Family 3 extracellular solute-binding protein {ECO:0000313|EMBL:AFU02552.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis
family 3 extracellular solute-binding protein
13_1_20cm_2_scaffold_4320_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3964..4806)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCX0_RHOPX
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU45039.1}; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
binding-protein-dependent transporter inner membrane component
13_1_20cm_2_scaffold_4320_6
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4799..5683)
DNA (885bp) protein (295aa)
ABC transport system ATP-binding protein NitT family {ECO:0000313|EMBL:AEI77625.1}; EC=3.6.3.- {ECO:0000313|EMBL:AEI77625.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
NitT family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transport system ATP-binding protein NitT family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0F0J6_CUPNN
13_1_20cm_2_scaffold_4320_7
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5801..6673)
DNA (873bp) protein (291aa)
Alpha/beta hydrolase fold protein n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RMR1_DEIPM
alpha/beta hydrolase fold protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
13_1_20cm_2_scaffold_4320_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6767..8740
DNA (1974bp) protein (658aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B65FFA rbh
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACZ40194.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Spha
peptidase S9 prolyl oligopeptidase active site domain-containing protein
13_1_20cm_2_scaffold_4320_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8758..10596
DNA (1839bp) protein (613aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000370C3B1
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_4320_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10800..11285)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_4320_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11316..11993
DNA (678bp) protein (226aa)
Methyltransferase type 11 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028M1_SOLUE
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
type 11 methyltransferase
13_1_20cm_2_scaffold_4320_12
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

12040..12246
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNA9_DESMR
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
hypothetical protein
13_1_20cm_2_scaffold_4320_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12319..13944)
DNA (1626bp) protein (542aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AJ1_SOLUE rbh
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
amidohydrolase
13_1_20cm_2_scaffold_4320_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14129..15685
DNA (1557bp) protein (519aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_4320_15
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16211..18457
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XMZ2_DESMR rbh
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:KHK03765.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="De
hypothetical protein
13_1_20cm_2_scaffold_4320_16
unknown

Not on your lists

comp(18556..18777)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_2_scaffold_4320_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18950..21367)
DNA (2418bp) protein (806aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NP4_SOLUE rbh
peptidase M14, carboxypeptidase A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptidase M14, carboxypeptidase A
Displaying 17 items

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