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13_1_20cm_2_scaffold_4613

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4613_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..747)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036DC87C
putative phosphoribosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
phosphoribosyltransferase
13_1_20cm_2_scaffold_4613_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(734..1672)
DNA (939bp) protein (313aa)
Sigma-54 interaction domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIK9_CHLTF
sigma-54 dependent trancsriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma-54 interaction domain-containing protein
13_1_20cm_2_scaffold_4613_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1786..2166)
DNA (381bp) protein (127aa)
Ribosomal silencing factor RsfS n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVS3_KORVE
Iojap-related protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Iojap-related protein
13_1_20cm_2_scaffold_4613_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2153..2779)
DNA (627bp) protein (209aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X086_9FIRM
13_1_20cm_2_scaffold_4613_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2776..3804)
DNA (1029bp) protein (343aa)
GTPase Obg n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHY5_CHLTF
Obg family GTPase CgtA; K03979 GTP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Obg family GTPase CgtA
13_1_20cm_2_scaffold_4613_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(3877..4134)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL27_KORVE
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rpmA; 50S ribosomal protein L27
13_1_20cm_2_scaffold_4613_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(4138..4452)
DNA (315bp) protein (105aa)
50S ribosomal protein L21 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ53_9BACT
rplU; 50S ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rplU; 50S ribosomal protein L21
13_1_20cm_2_scaffold_4613_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4598..5332)
DNA (735bp) protein (245aa)
id=12555756 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_4613_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5298..5657)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B3DCAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_20cm_2_scaffold_4613_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5932..7023
DNA (1092bp) protein (364aa)
DNA protecting protein DprA n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIP9_DESK7
Smf; Rossmann fold nucleotide-binding protein; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
DNA protecting protein DprA
13_1_20cm_2_scaffold_4613_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7031..9490
DNA (2460bp) protein (820aa)
DNA topoisomerase; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003763D11
DNA topoisomerase
13_1_20cm_2_scaffold_4613_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9588..11042
DNA (1455bp) protein (485aa)
tRNA (uracil-5-)-methyltransferase Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tRNA:m(5)U-54 methyltransferase (EC:2.1.1.74)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYU6_9BACT
13_1_20cm_2_scaffold_4613_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10999..11793
DNA (795bp) protein (265aa)
Tyrosine recombinase XerC n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z2F3_DESAT
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tyrosine recombinase XerC
Displaying 13 items

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