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13_1_20cm_2_scaffold_544

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_544_trna_1
unknown

Not on your lists

comp(55..126)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_544_1
unknown

Not on your lists

comp(173..1027)
DNA (855bp) protein (285aa)

This feature has no annotations

13_1_20cm_2_scaffold_544_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1024..1557)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003779B3B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_20cm_2_scaffold_544_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1598..1978
DNA (381bp) protein (127aa)
Response regulator (CheY-like receiver, AAA-type ATPase and DNA-binding domain containing protein) n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GNZ5_9DELT
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
response regulator receiver protein
13_1_20cm_2_scaffold_544_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1978..2610
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_20cm_2_scaffold_544_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2615..3526)
DNA (912bp) protein (304aa)
rocF; arginase (EC:3.5.3.1); K01476 arginase [EC:3.5.3.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Arginase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ4_KORVE
arginase
13_1_20cm_2_scaffold_544_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3523..4923)
DNA (1401bp) protein (467aa)
protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A2_SPHTD
13_1_20cm_2_scaffold_544_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5029..5859)
DNA (831bp) protein (277aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A1_SPHTD
13_1_20cm_2_scaffold_544_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5900..6844)
DNA (945bp) protein (315aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_20cm_2_scaffold_544_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6934..7329)
DNA (396bp) protein (132aa)
Transcriptional regulator n=2 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5XHE1_MYCNE
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator
13_1_20cm_2_scaffold_544_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7465..8076
DNA (612bp) protein (204aa)
phaF; poly(3-hydroxyalkanoate) granule-associated protein PhaF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_544_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8130..8717
DNA (588bp) protein (196aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_544_12
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8743..9324
DNA (582bp) protein (194aa)
TVP38/TMEM64 family membrane protein slr0305 n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI000346F28A
Uncharacterized protein {ECO:0000313|EMBL:AFY47955.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7
hypothetical protein
13_1_20cm_2_scaffold_544_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9334..10650
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 105 RepID=Q6SI42_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_544_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10676..11596)
DNA (921bp) protein (307aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P832_METFA
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA methylase N-4/N-6 domain-containing protein
13_1_20cm_2_scaffold_544_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11744..11953)
DNA (210bp) protein (70aa)
id=12556922 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_544_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12117..14561)
DNA (2445bp) protein (815aa)
Spermine/spermidine synthase family protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFF2_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
Displaying 17 items

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