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13_1_20cm_2_scaffold_7139

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_7139_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2..562)
DNA (561bp) protein (187aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Aspartate ammonia-lyase n=2 Tax=Geobacter sulfurreducens RepID=D7AF31_GEOSK
aspA; aspartate ammonia-lyase
13_1_20cm_2_scaffold_7139_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

605..2149
DNA (1545bp) protein (515aa)
fumarase (EC:4.2.1.2); K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
fumarase (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D1033
13_1_20cm_2_scaffold_7139_3
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2280..2624
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Geobacillus thermoglucosidans TNO-09.020 RepID=I0U7C3_GEOTM
Synaptonemal complex 1 {ECO:0000313|EMBL:ADP75186.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y4.1MC1).;"
Synaptonemal complex 1
13_1_20cm_2_scaffold_7139_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2596..3537)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q0P4_DESAF
protein involved in formate dehydrogenase formation; K02380 FdhE protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
formate dehydrogenase accessory protein
13_1_20cm_2_scaffold_7139_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3558..3887
DNA (330bp) protein (110aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=root RepID=I0IMD9_LEPFC
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
iron-sulfur cluster assembly accessory protein
13_1_20cm_2_scaffold_7139_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3963..4919
DNA (957bp) protein (319aa)
Ferric uptake regulation protein n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30XX4_DESDG
Fe2+/Zn2+ uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ferric uptake regulation protein
13_1_20cm_2_scaffold_7139_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4916..5563
DNA (648bp) protein (216aa)
PHP domain protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8D8_AMMDK
phP-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PHP domain-containing protein
13_1_20cm_2_scaffold_7139_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5640..6071)
DNA (432bp) protein (144aa)
Type 12 methyltransferase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TL85_9DELT
tehB; SAM-dependent methyltransferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
type 12 methyltransferase
13_1_20cm_2_scaffold_7139_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

6180..6620
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_20cm_2_scaffold_7139_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

6617..7333
DNA (717bp) protein (239aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ABC transporter, ATP-binding protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6C0_BREDI
proV; glycine betaine/proline porter
13_1_20cm_2_scaffold_7139_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7360..7815
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI0003715962
atpases of the aaa+ class Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
putative uncharacterized protein
13_1_20cm_2_scaffold_7139_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

8031..8231
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SMY5_PLABD
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
cold-shock DNA-binding protein family
13_1_20cm_2_scaffold_7139_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

8311..8931
DNA (621bp) protein (207aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNX9_OPITP
hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hydrolase
Displaying 13 items

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