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13_1_20cm_2_scaffold_777

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_777_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2..766)
DNA (765bp) protein (255aa)
RNA polymerase sigma-54 factor n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5S6_GEOUR
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
RNA polymerase sigma-54 subunit RpoN
13_1_20cm_2_scaffold_777_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(885..1610)
DNA (726bp) protein (242aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES0_9BACT
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
13_1_20cm_2_scaffold_777_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1719..3806)
DNA (2088bp) protein (696aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS1_CHLTF
hypothetical protein; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_777_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3875..5593)
DNA (1719bp) protein (573aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Single-stranded-DNA-specific exonuclease RecJ alias=gwe2_scaffold_8_671 id=2167627 tax=TA06 species=Caldithrix abyssi DSM 13497 genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown rbh
single-stranded-DNA-specific exonuclease RecJ
13_1_20cm_2_scaffold_777_5
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5673..6062
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJS1_PLABD
Uncharacterized protein {ECO:0000313|EMBL:ADY61909.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasi
hypothetical protein
13_1_20cm_2_scaffold_777_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6151..7122)
DNA (972bp) protein (324aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_c
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDG9_DEFDS
acetyl-CoA carboxylase subunit alpha
13_1_20cm_2_scaffold_777_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7257..10838)
DNA (3582bp) protein (1194aa)
dnaE3; DNA polymerase III, alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA polymerase III, alpha subunit n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKP3_9BACT
DNA polymerase III subunit alpha
13_1_20cm_2_scaffold_777_8
unknown

Not on your lists

comp(11138..11656)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_20cm_2_scaffold_777_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11647..12822)
DNA (1176bp) protein (392aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=GUAA_MOOTA
13_1_20cm_2_scaffold_777_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12785..13135)
DNA (351bp) protein (117aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y5M6_CLOSH
13_1_20cm_2_scaffold_777_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13338..14489
DNA (1152bp) protein (384aa)
Pyrrolo-quinoline quinone n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QGS3_SPILD
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
pyrrolo-quinoline quinone
13_1_20cm_2_scaffold_777_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14994..16046)
DNA (1053bp) protein (351aa)
id=12554055 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_777_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16072..20124
DNA (4053bp) protein (1351aa)
Putative uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=C6G4E0_9BACT rbh
sensory transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_777_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(20295..22133)
DNA (1839bp) protein (613aa)
polyvinyl-alcohol dehydrogenase (EC:1.1.2.6); K05889 polyvinyl alcohol dehydrogenase (cytochrome) [EC:1.1.2.6] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Polyvinyl-alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3P4_BRAJP
cytochrome Cbb3
13_1_20cm_2_scaffold_777_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22199..23044)
DNA (846bp) protein (282aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JN50_9GAMM
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
CDP-diacylglycerol/serine O-phosphatidyltransferase
13_1_20cm_2_scaffold_777_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23075..23701)
DNA (627bp) protein (209aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2U5_MODMB
13_1_20cm_2_scaffold_777_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23772..23999)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP38_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_777_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24191..24670)
DNA (480bp) protein (160aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSU4_9FIRM
13_1_20cm_2_scaffold_777_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24636..25358)
DNA (723bp) protein (241aa)
tRNA threonylcarbamoyl adenosine modification protein YeaZ n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6R1_9CLOT
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
peptidase M22 glycoprotease
13_1_20cm_2_scaffold_777_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25436..27442
DNA (2007bp) protein (669aa)
DNA mismatch repair protein MutS n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=MUTS_PELCD
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
mutS-1; DNA mismatch repair protein MutS
Displaying 20 items

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