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13_1_20cm_2_scaffold_8210

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8210_1
unknown

Not on your lists

comp(2..262)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

13_1_20cm_2_scaffold_8210_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(381..3785)
-----------------
DNA (3405bp)
protein (1135aa)
Type IV fimbrial biogenesis PilY1-related protein n=2 Tax=Legionella longbeachae RepID=D1RK63_LEGLO
Putative type IV pilus assembly protein, tip-associated adhesin PilY; K02674 type IV pilus assembly protein PilY1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
type 4 fimbrial biogenesis protein PilY1
13_1_20cm_2_scaffold_8210_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(3788..4588)
-----------------
DNA (801bp)
protein (267aa)
id=12555532 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_8210_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4600..5718)
-----------------
DNA (1119bp)
protein (373aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_8210_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5752..6372)
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHJ3_HALO1
id=12555534 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K02671 type IV pilus assembly protein PilV
13_1_20cm_2_scaffold_8210_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6341..6940)
-----------------
DNA (600bp)
protein (200aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWL6_9BACT
pilin assembly protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
pilin assembly protein
13_1_20cm_2_scaffold_8210_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(7108..8367)
-----------------
DNA (1260bp)
protein (420aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA8_KORVE
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PAS/PAC sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_8210_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8364..8633)
-----------------
DNA (270bp)
protein (90aa)
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_8210_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8818..9765)
-----------------
DNA (948bp)
protein (316aa)
Sulfatase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P212_9BACT
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
sulfatase
13_1_20cm_2_scaffold_8210_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9924..11063)
-----------------
DNA (1140bp)
protein (380aa)
sulfatase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_8210_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11218..11994)
-----------------
DNA (777bp)
protein (259aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035D0F3A
peptidase A24A domain-containing protein
13_1_20cm_2_scaffold_8210_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11991..12932)
-----------------
DNA (942bp)
protein (314aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRC5_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_8210_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12950..13669)
-----------------
DNA (720bp)
protein (240aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PLS6_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ABC transporter permease
13_1_20cm_2_scaffold_8210_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13734..14324)
-----------------
DNA (591bp)
protein (197aa)
ABC transporter ATP-binding protein n=1 Tax=sediment metagenome RepID=D9PLS7_9ZZZZ
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
multidrug ABC transporter ATPase
13_1_20cm_2_scaffold_8210_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14670..15872)
-----------------
DNA (1203bp)
protein (401aa)
Membrane protein containing Vitamin K epoxide reductase domain n=1 Tax=sediment metagenome RepID=D9PJ66_9ZZZZ
vitamin K epoxide reductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
vitamin K epoxide reductase
13_1_20cm_2_scaffold_8210_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15975..16151)
-----------------
DNA (177bp)
protein (59aa)
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ
fimbrial protein pilin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 16 items

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