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13_1_20cm_2_scaffold_930

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_930_1
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3..1757)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZWX6_9PLAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
hypothetical protein
13_1_20cm_2_scaffold_930_2
unknown

Not on your lists

comp(2286..2741)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_930_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2849..5875
DNA (3027bp) protein (1009aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D60_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_2_scaffold_930_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5974..8538)
DNA (2565bp) protein (855aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D1DE5
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
efflux ABC transporter inner membrane protein
13_1_20cm_2_scaffold_930_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8845..9771
DNA (927bp) protein (309aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026X6_SOLUE rbh
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ82937.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus So
xylose isomerase domain-containing protein
13_1_20cm_2_scaffold_930_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9874..11688
DNA (1815bp) protein (605aa)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ85877.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ85877.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WT8_SOLUE rbh
13_1_20cm_2_scaffold_930_7
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

Not on your lists

11685..12440
DNA (756bp) protein (252aa)
glucose-1-dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2F48B rbh
3-ketoacyl-ACP reductase Tax=RBG_19FT_COMBO_OP11_39_10_curated
short chain dehydrogenase/reductase family oxidoreductase
13_1_20cm_2_scaffold_930_8
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12437..13171
DNA (735bp) protein (245aa)
Cyclase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5E9_THERP
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69148.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
cyclase family protein
13_1_20cm_2_scaffold_930_9
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13332..14123
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HK85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ45457.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
13_1_20cm_2_scaffold_930_10
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14230..17457)
DNA (3228bp) protein (1076aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037499C5
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW71107.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain
TonB-dependent receptor plug
13_1_20cm_2_scaffold_930_11
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17581..18372
DNA (792bp) protein (264aa)
sulfatase n=1 Tax=Zavarzinella formosa RepID=UPI0003064DEB
Uncharacterized protein {ECO:0000313|EMBL:ADB18155.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pire
hypothetical protein
13_1_20cm_2_scaffold_930_12
unknown

Not on your lists

18461..18601
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_2_scaffold_930_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18987..21047)
DNA (2061bp) protein (687aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA ligase (EC:6.5.1.1)
DNA ligase D n=1 Tax=Cytophaga aurantiaca RepID=UPI000375F81D
13_1_20cm_2_scaffold_930_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21084..21857)
DNA (774bp) protein (258aa)
Probable DNA repair protein SCE1572_15910 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVC1_SORCE
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA repair protein
13_1_20cm_2_scaffold_930_15
unknown

Not on your lists

comp(21870..22229)
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_2_scaffold_930_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22319..25756)
DNA (3438bp) protein (1146aa)
Trehalose synthase n=2 Tax=Singulisphaera acidiphila RepID=L0DL59_SINAD rbh
trehalose synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
trehalose synthase
13_1_20cm_2_scaffold_930_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(25732..27807)
DNA (2076bp) protein (692aa)
glgE; glycosidase hydrolase (EC:3.2.1.-) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L230_THERP
putative glycanase or glycogenase with amylase domain
13_1_20cm_2_scaffold_930_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(27836..29980)
DNA (2145bp) protein (715aa)
isoamylase; K02438 glycogen operon protein GlgX [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Glycogen debranching enzyme GlgX n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ85_9BACT alias=16ft_combo_ws3_scaffold_6917_14 id=5225495 tax=16ft_combo_ws3 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae rbh
glycogen debranching protein GlgX
13_1_20cm_2_scaffold_930_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30042..32684)
DNA (2643bp) protein (881aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U78_SOLUE rbh
Permease {ECO:0000313|EMBL:AHG92769.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease
13_1_20cm_2_scaffold_930_20
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32686..33021)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000376EC0A
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACO32580.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsu
PadR family transcriptional regulator
Displaying 20 items

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