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13_1_20cm_2_scaffold_3900_3

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: comp(1978..2853)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 282.0
  • Bit_score: 270
  • Evalue 1.40e-69
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubro UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 282.0
  • Bit_score: 270
  • Evalue 2.10e-69
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 282.0
  • Bit_score: 270
  • Evalue 4.10e-70

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGCAGCGACTGACTGGGACGAGGCAACGTTCGAGGCGTATCGACCGCTGTTGTTCTCGATTGCGTACAGGATGCTCAGCAGCGCCAGCGAAGCCGAGGATGTCATTCAGGATGCGTGGCTCCGGGCGCGTCAGGACCAGCACGCCGACGTCCGCTCCCCTCGCGCGTATCTCACGACCATCGTCACGCGGCTGTGCATCGACCATCTGCGCAGCGCCGAGCGGACTCGCATGGAGTATCCAGGTCCATGGCTGCCTGAACCGTTGGCAGAACCAAATCAGGAATCCGCCGAGCTAGCGTCGTCCCTGACGACGGCATTCCTCGTACTGCTGGAGCACCTGGCGCCGACCGAGCGCGCGGTCTTCCTGCTGCGCGAGGTGTTCGAGCTCGACTTCGACGAGATCGCGAGGAGCGTCGGCAAGAGCGAGGCGAACACGCGGCAGATCCTCACGCGGGCACGCGGCCGGCTGCGCGATTCGCGTCCGCGCTTCACCGTGTCGCGTCGTGAATCGGAGGAGATCGTGCGGCGCTTCCGGCACGCCTGCGTCACCGGCAACGTCGAAGAGCTGATGGCGGTGCTGCACGCCGACGCGGAGCTCGTCTCCGATGGCGGCGGCAAGGCGGCCGCGGCGACGCGTCCCGTGCTCGGCGCGGATCGCATAGCGAAGTTCGTGCTCGGCTATGCCGGCAAGATGCACTGGTCGGAGTCGGACTTCCAGCTCGTCACGATCAACGGCGCGCCCGGTCTGCTCATGCGCCATCCGATCTCCGGCAACGGCACCCACTCGTTCGACATCGCCGACGGCCGCATTCGCGCGATCTACATCGTGCGCAACCCCGACAAGCTGCGTGGTTTCCTCGAGCACACGCATTGA
PROTEIN sequence
Length: 292
MAATDWDEATFEAYRPLLFSIAYRMLSSASEAEDVIQDAWLRARQDQHADVRSPRAYLTTIVTRLCIDHLRSAERTRMEYPGPWLPEPLAEPNQESAELASSLTTAFLVLLEHLAPTERAVFLLREVFELDFDEIARSVGKSEANTRQILTRARGRLRDSRPRFTVSRRESEEIVRRFRHACVTGNVEELMAVLHADAELVSDGGGKAAAATRPVLGADRIAKFVLGYAGKMHWSESDFQLVTINGAPGLLMRHPISGNGTHSFDIADGRIRAIYIVRNPDKLRGFLEHTH*