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13_1_20cm_2_scaffold_3900

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3900_1
unknown

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3..74
DNA (72bp) protein (24aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_2
unknown

Not on your lists

comp(720..1646)
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(1978..2853)
DNA (876bp) protein (292aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI5_RUBXD
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABG05293.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubro
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_3900_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2989..3486
DNA (498bp) protein (166aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D890C
hypothetical protein
13_1_20cm_2_scaffold_3900_5
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4148..4531
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E90F8F
Uncharacterized protein {ECO:0000313|EMBL:EDP70976.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
13_1_20cm_2_scaffold_3900_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4602..4964
DNA (363bp) protein (121aa)
Bleomycin resistance protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBA6_9RHOB
Bleomycin resistance protein {ECO:0000313|EMBL:EAQ14239.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimiba
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_2_scaffold_3900_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5077..7143)
DNA (2067bp) protein (689aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_20cm_2_scaffold_3900_8
unknown

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7223..7756
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_9
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7771..8733
DNA (963bp) protein (321aa)
Alpha/beta hydrolase fold family protein n=1 Tax=Microcystis aeruginosa TAIHU98 RepID=L7ED63_MICAE
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:ELP56608.1}; TaxID=1134457 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aerugin
hypothetical protein
13_1_20cm_2_scaffold_3900_10
unknown

Not on your lists

8693..8872
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_11

Not on your lists

8850..9881
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN49166.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_2_scaffold_3900_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10291..12777)
DNA (2487bp) protein (829aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC200
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_2_scaffold_3900_13
Methylobacter marinus, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..13614)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000372BC00
13_1_20cm_2_scaffold_3900_14
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..14139
DNA (351bp) protein (117aa)
PadR family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B62612
PadR family transcriptional regulator Tax=RBG_16_Gammaproteobacteria_66_13_curated
hypothetical protein
13_1_20cm_2_scaffold_3900_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14132..15481
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADE1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40518.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_2_scaffold_3900_16
unknown

Not on your lists

comp(15657..16055)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_17
unknown

Not on your lists

17005..17346
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_18
unknown

Not on your lists

17295..18185
DNA (891bp) protein (297aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18444..19031)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BV8_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3900_20
unknown

Not on your lists

comp(19065..19751)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_20cm_2_scaffold_3900_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20760..24935
DNA (4176bp) protein (1392aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MGW5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3900_22
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24869..25021)
DNA (153bp) protein (51aa)
Fosmidomycin resistance protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00031401E0
Major facilitator superfamily transporter {ECO:0000313|EMBL:EHP42590.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
fsr; major facilitator superfamily transporter
Displaying 22 items

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