ggKbase home page

13_1_20cm_2_scaffold_429

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_429_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3..1355)
DNA (1353bp) protein (451aa)
ATPase AAA-2 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Q2_SOLUE
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ATPase
13_1_20cm_2_scaffold_429_2
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1359..2144)
DNA (786bp) protein (262aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales;
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8B8_TERSS
ABC transporter-like protein
13_1_20cm_2_scaffold_429_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2491..3717)
DNA (1227bp) protein (409aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN2_KORVE
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
LolC/E family lipoprotein releasing system, transmembrane protein
13_1_20cm_2_scaffold_429_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3732..5294)
DNA (1563bp) protein (521aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Lysine--tRNA ligase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZJ4_TERSS
lysyl-tRNA synthetase
13_1_20cm_2_scaffold_429_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5385..5696)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PN08_9ACTO
ycdJ; arylesterase Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_2_scaffold_429_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

5746..6018
DNA (273bp) protein (91aa)
YCII-related n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JC85_ANAD2
YciI-like protein; K09780 hypothetical protein Tax=GWA2_Elusimicrobia_69_24_curated
YciI-like protein
13_1_20cm_2_scaffold_429_7
unknown

Not on your lists

6116..6910
DNA (795bp) protein (265aa)

This feature has no annotations

13_1_20cm_2_scaffold_429_8

Not on your lists

6929..9283
DNA (2355bp) protein (785aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QKB6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_1_20cm_2_scaffold_429_9
unknown

Not on your lists

9390..10115
DNA (726bp) protein (242aa)

This feature has no annotations

13_1_20cm_2_scaffold_429_10
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10271..10915
DNA (645bp) protein (215aa)
RNA polymerase sigma factor n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3F9_ACIC5
RNA polymerase sigma factor {ECO:0000313|EMBL:ACO33209.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (stra
RNA polymerase sigma factor
13_1_20cm_2_scaffold_429_11
unknown

Not on your lists

11017..11676
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_20cm_2_scaffold_429_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11678..12559
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI00037D1576
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_429_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

12648..13175
DNA (528bp) protein (176aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
shikimate kinase (EC:2.7.1.71)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375E787
13_1_20cm_2_scaffold_429_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

13304..14047
DNA (744bp) protein (248aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_20cm_2_scaffold_429_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14204..14953)
DNA (750bp) protein (250aa)
Transcriptional regulator, XRE family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT4_KORVE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF40416.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
XRE family transcriptional regulator
13_1_20cm_2_scaffold_429_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15287..15754
DNA (468bp) protein (156aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT6_KORVE
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
metal dependent phosphohydrolase
Displaying 16 items

View Taxonomy