ggKbase home page

13_1_20cm_2_scaffold_780

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_780_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

1..324
DNA (324bp) protein (108aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=QUEE_KORVE
radical SAM family Fe-S protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
radical SAM protein
13_1_20cm_2_scaffold_780_2
unknown

Not on your lists

comp(293..667)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_2_scaffold_780_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

1099..2247
DNA (1149bp) protein (383aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHK5_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_20cm_2_scaffold_780_4
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

2298..2603
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLE2_9CYAN
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
13_1_20cm_2_scaffold_780_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2969..4840
DNA (1872bp) protein (624aa)
Asparagine synthase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HXX3_CYAP4
Asparagine synthase {ECO:0000313|EMBL:ACL43412.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 291
asparagine synthase
13_1_20cm_2_scaffold_780_6
unknown

Not on your lists

4837..4986
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_2_scaffold_780_7
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4949..6043
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00037200A4
HPr kinase {ECO:0000313|EMBL:ACL43411.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
HPr kinase
13_1_20cm_2_scaffold_780_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

6046..7200
DNA (1155bp) protein (385aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHR2_9CYAN
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AGY58403.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS
prmA; ribosomal protein L11 methyltransferase
13_1_20cm_2_scaffold_780_9
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7264..8433
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V715_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AFZ03611.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
hypothetical protein
13_1_20cm_2_scaffold_780_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8513..9556)
DNA (1044bp) protein (348aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK0_SOLUE
PDZ/DHR/GLGF Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PDZ/DHR/GLGF domain-containing protein
13_1_20cm_2_scaffold_780_11
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(9594..10358)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISW0_KORVE
hypothetical protein Tax=RBG_13_Aminicenantes_59_9_curated
hypothetical protein
13_1_20cm_2_scaffold_780_12
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10459..12246)
DNA (1788bp) protein (596aa)
Peptidase S7, flavivirus helicase (NS3) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX5_KORVE
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
peptidase S7
13_1_20cm_2_scaffold_780_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12298..13416)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037677EB
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
transmembrane anti-sigma factor
13_1_20cm_2_scaffold_780_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13413..14090)
DNA (678bp) protein (226aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX3_KORVE
RNA polymerase, sigma subunit, ECF family {ECO:0000313|EMBL:ABF43527.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_780_15
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14354..17794)
DNA (3441bp) protein (1147aa)
Abortive infection protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023Y2_SOLUE
abortive infection protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
abortive infection protein
13_1_20cm_2_scaffold_780_16
unknown

Not on your lists

comp(17766..18020)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 16 items

View Taxonomy