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13_1_20cm_2_scaffold_1276

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1276_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X56_SOLUE
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein
13_1_20cm_2_scaffold_1276_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(263..760)
DNA (498bp) protein (166aa)
(2Fe-2S)-binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X57_SOLUE
(2Fe-2S)-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
(2Fe-2S)-binding protein
13_1_20cm_2_scaffold_1276_trna_1
unknown

Not on your lists

comp(912..993)
DNA (82bp)
transferRNA
13_1_20cm_2_scaffold_1276_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1001..1405)
DNA (405bp) protein (135aa)
Protein translocase subunit secG n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RN5_SOLUE
Protein translocase subunit secG {ECO:0000313|EMBL:ABJ87685.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;
protein translocase subunit SecG
13_1_20cm_2_scaffold_1276_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(1402..2121)
DNA (720bp) protein (240aa)
TpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=TPIS_GEOLS
13_1_20cm_2_scaffold_1276_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2151..3332)
DNA (1182bp) protein (394aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=981222 species="Bacteria;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGZ9_CHLTF rbh
13_1_20cm_2_scaffold_1276_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3332..4330)
DNA (999bp) protein (333aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003676D13
glyceraldehyde-3-phosphate dehydrogenase
13_1_20cm_2_scaffold_1276_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4387..5643
DNA (1257bp) protein (419aa)
kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG21_9BACT
hypothetical protein
13_1_20cm_2_scaffold_1276_8
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5640..6578
DNA (939bp) protein (313aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RBG_16_Deltaproteobacteria_58_17_curated
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E4I2_GEOLS
13_1_20cm_2_scaffold_1276_9
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6568..7587
DNA (1020bp) protein (340aa)
rfaF_gmhB; bifunctional lipopolysaccharide heptosyltransferase II/D, D-heptose 1,7-bisphosphate phosphatase (EC:2.4.-.- 3.1.3.-)
Lipopolysaccharide heptosyltransferase II and D, D-heptose 1,7-bisphosphate phosphatase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHJ0_9BACT
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KIE41806.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
13_1_20cm_2_scaffold_1276_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7587..8135
DNA (549bp) protein (183aa)
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:CDM65986.1}; EC=3.1.3.82 {ECO:0000313|EMBL:CDM65986.1};; EC=3.1.3.83 {ECO:0000313|EMBL:CDM65986.1};; TaxID=454194 species="Bacteria; A
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS6_CHLTF
13_1_20cm_2_scaffold_1276_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

8132..8512
DNA (381bp) protein (127aa)
d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-) Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
Bifunctional protein HldE n=1 Tax=Geobacter sp. (strain M18) RepID=E8WSS6_GEOS8
rfaE bifunctional protein
13_1_20cm_2_scaffold_1276_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8513..9577
DNA (1065bp) protein (355aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ADP-heptose:LPS heptosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA7_CHLTF
ADP-heptose--LPS heptosyltransferase
13_1_20cm_2_scaffold_1276_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9588..10118
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZLT0_TERRK
S-isoprenylcysteine methyltransferase-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
phospholipid methyltransferase
13_1_20cm_2_scaffold_1276_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

10205..10708
DNA (504bp) protein (168aa)
Ribosome maturation factor RimP n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=RIMP_PELPD
hypothetical protein; K09748 ribosome maturation factor RimP Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1276_15
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

10714..12120
DNA (1407bp) protein (469aa)
antitermination factor NusA n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037D9EAD
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
NusA antitermination factor
13_1_20cm_2_scaffold_1276_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

12204..14903
DNA (2700bp) protein (900aa)
Translation initiation factor IF-2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=IF2_SOLUE
translation initiation factor 2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
translation initiation factor 2
13_1_20cm_2_scaffold_1276_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15098..15382
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366BAE8
hypothetical protein; K09764 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_1276_18
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15435..15788
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WCV4_9BACI
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus
rbfA; ribosome-binding factor A
13_1_20cm_2_scaffold_1276_19
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

15785..16672
DNA (888bp) protein (296aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=GWC2_Nitrospirae_57_9_curated
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZB3_ANATU
13_1_20cm_2_scaffold_1276_20
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16720..16989
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMY6_GEOS8
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
30S ribosomal protein S15
13_1_20cm_2_scaffold_1276_21
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

17219..19336
DNA (2118bp) protein (706aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373BE7D
polynucleotide phosphorylase
13_1_20cm_2_scaffold_1276_22
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19384..19698)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037D69CC
Uncharacterized protein Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 23 items

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