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13_1_20cm_2_scaffold_2201

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2201_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3..1106)
DNA (1104bp) protein (368aa)
TonB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029J5_SOLUE
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
TonB family protein
13_1_20cm_2_scaffold_2201_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1275..1775
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQI9_KORVE
signal peptidase II
13_1_20cm_2_scaffold_2201_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1750..2670
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source=
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E024A
pseudouridine synthase
13_1_20cm_2_scaffold_2201_4
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

3250..4185
DNA (936bp) protein (312aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUR4_9BACT rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHO41613.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
13_1_20cm_2_scaffold_2201_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4260..5102)
DNA (843bp) protein (281aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RX9_SOLUE
HemK family modification methylase
13_1_20cm_2_scaffold_2201_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5099..6202)
DNA (1104bp) protein (368aa)
Peptide chain release factor 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RF1_KORVE
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Can
prfA; peptide chain release factor 1
13_1_20cm_2_scaffold_2201_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6205..7173)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0L1_GEODF rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM09549.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1
hypothetical protein
13_1_20cm_2_scaffold_2201_8
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists


comp(7185..7388)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5S9E3_9BACT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bac
50S ribosomal protein L31
13_1_20cm_2_scaffold_2201_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


7716..9461
DNA (1746bp) protein (582aa)
30S ribosomal protein S1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YK5_SOLUE rbh
rpsA; ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
30S ribosomal protein S1
13_1_20cm_2_scaffold_2201_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9522..10367
DNA (846bp) protein (282aa)
Signal peptide peptidase A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ44_KORVE
Signal peptide peptidase A {ECO:0000313|EMBL:ABF43106.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koriba
signal peptide peptidase SppA
13_1_20cm_2_scaffold_2201_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10547..10885
DNA (339bp) protein (113aa)
Bacterial nucleoid protein Hbs n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ45_KORVE
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:ABF43105.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
nucleoid protein Hbs
13_1_20cm_2_scaffold_2201_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

10887..11366
DNA (480bp) protein (160aa)
HIT domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H3T0_9DELT
histidine triad (HIT) protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
histidine triad (HIT) protein
13_1_20cm_2_scaffold_2201_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11401..11862)
DNA (462bp) protein (154aa)
acetyltransferase (EC:2.3.1.-); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
GCN5-related N-acetyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE5_9BACT
ribosomal-protein-alanine acetyltransferase
13_1_20cm_2_scaffold_2201_14
unknown

Not on your lists

11887..12150
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_2201_15
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

12157..12732
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037F2F94
MoeA-like protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
pcmX; MobA-related glycosyltransferase
13_1_20cm_2_scaffold_2201_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12729..14387
DNA (1659bp) protein (553aa)
Gamma-glutamyltranspeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDJ7_SINAD rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:AGA26888.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaer
gamma-glutamyltranspeptidase
13_1_20cm_2_scaffold_2201_17
unknown

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14447..14638
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_2_scaffold_2201_18
unknown

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14639..14848
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 18 items

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