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13_1_20cm_2_scaffold_231

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_231_1
unknown

Not on your lists

2..220
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_231_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(631..1959)
DNA (1329bp) protein (443aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_16_Chloroflexi_48_8_curated
Aspartokinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1C3_CALAS
putative aspartokinase
13_1_20cm_2_scaffold_231_3
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2071..4815)
DNA (2745bp) protein (915aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1) Tax=GWA2_Ignavibacteria_54_16_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleotide reductase of class II (Coenzyme B12-dependent) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QG73_9DELT rbh
13_1_20cm_2_scaffold_231_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4908..5972)
DNA (1065bp) protein (355aa)
Two-component hybrid sensor and regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCL2_9DELT
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EPX59074.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystoba
two-component sensor histidine kinase
13_1_20cm_2_scaffold_231_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(6181..6813)
DNA (633bp) protein (211aa)
Response regulator with a HTH DNA-binding domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRF9_SYNAS
response regulator Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
response regulator
13_1_20cm_2_scaffold_231_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6810..8402)
DNA (1593bp) protein (531aa)
putative sensor histidine kinase (EC:2.7.13.3) Tax=RBG_16_Deltaproteobacteria_54_11_curated
histidine kinase n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039D7A0C
signal transduction histidine kinase
13_1_20cm_2_scaffold_231_7
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8399..11065)
DNA (2667bp) protein (889aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor {ECO:0000313|EMBL:BAN34776.1}; EC=2.1.1.80 {ECO:0000313|EMBL:BAN34776.1};; EC=3.1.1.61 {ECO:0000313|EMBL:BAN34776.1};; TaxID=1163617
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor (EC:2.1.1.80 3.1.1.61)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFT6_9PROT
13_1_20cm_2_scaffold_231_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11200..11685)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC8C
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_2_scaffold_231_9
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(11689..12519)
DNA (831bp) protein (277aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=20453
Putative uncharacterized protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWG4_SULAA
hypothetical protein
13_1_20cm_2_scaffold_231_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12576..13475)
DNA (900bp) protein (300aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003714796 rbh
panC; pantoate--beta-alanine ligase
13_1_20cm_2_scaffold_231_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13429..14283)
DNA (855bp) protein (285aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629A3 rbh
13_1_20cm_2_scaffold_231_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14287..15399)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037F75F0
Glycosyl transferase {ECO:0000313|EMBL:CDM66968.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycosyltransferase
13_1_20cm_2_scaffold_231_13
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15446..16402)
DNA (957bp) protein (319aa)
Geranylgeranyl reductase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J4J5_FRASU
Geranylgeranyl reductase {ECO:0000313|EMBL:ADP84259.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
geranylgeranyl reductase
13_1_20cm_2_scaffold_231_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16399..17046)
DNA (648bp) protein (216aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FFB9_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
methylase
13_1_20cm_2_scaffold_231_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17039..18328)
DNA (1290bp) protein (430aa)
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:CDM67112.1}; EC=2.3.1.179 {ECO:0000313|EMBL:CDM67112.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367F0FE
beta-ketoacyl synthase
13_1_20cm_2_scaffold_231_16
unknown

Not on your lists

18384..18569
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_20cm_2_scaffold_231_17
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

18731..19057
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDW7_CHLTF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=458033 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
thioredoxin
13_1_20cm_2_scaffold_231_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

19063..20334
DNA (1272bp) protein (424aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Nitrospirae_64_22_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003670304
13_1_20cm_2_scaffold_231_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20520..21332)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88245.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
major facilitator superfamily MFS_1
Displaying 19 items

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