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13_1_20cm_2_scaffold_414

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_414_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1..1713
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037A074B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_2_scaffold_414_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1969..3327
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VJ1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ86324.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
thiol-disulfide isomerase
13_1_20cm_2_scaffold_414_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3357..4463)
DNA (1107bp) protein (369aa)
DGQHR domain protein n=1 Tax=uncultured prokaryote RepID=H5SKN6_9ZZZZ
DGQHR domain protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_20cm_2_scaffold_414_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4568..7756)
DNA (3189bp) protein (1063aa)
RND transporter n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW12_SORCE
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_6_Rokubacteria
RND transporter
13_1_20cm_2_scaffold_414_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7778..8992)
DNA (1215bp) protein (405aa)
RND family efflux transporter, MFP subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKW5_CHLTF
RND family efflux transporter MFP subunit Tax=GWA2_Deltaproteobacteria_65_63_curated
RND family efflux transporter MFP subunit
13_1_20cm_2_scaffold_414_6
RLO_PLX_64_10, Bacteria

Not on your lists

9064..10077
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RRK8_9PLAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_2_scaffold_414_7
RLO_PLX_64_10, Bacteria

Not on your lists

10074..11117
DNA (1044bp) protein (348aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAJ0_9BACT
13_1_20cm_2_scaffold_414_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11123..11749)
DNA (627bp) protein (209aa)
Zinc-dependent metalloprotease n=1 Tax=uncultured Acidobacteria bacterium RepID=G8DPN3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_2_scaffold_414_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11742..12296)
DNA (555bp) protein (185aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRB0_9DELT
13_1_20cm_2_scaffold_414_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12435..13868
DNA (1434bp) protein (478aa)
TPR repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIM3_KORVE
TPR repeat protein {ECO:0000313|EMBL:ABF43277.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
hypothetical protein
13_1_20cm_2_scaffold_414_11
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14168..15997
DNA (1830bp) protein (610aa)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0K3_DESTA
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rul
phosphoenolpyruvate carboxykinase (GTP)
13_1_20cm_2_scaffold_414_12
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15913..17844)
DNA (1932bp) protein (644aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospir
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A707_ALKEH
13_1_20cm_2_scaffold_414_13
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(17844..18887)
DNA (1044bp) protein (348aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00035C9C2A
13_1_20cm_2_scaffold_414_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18845..19141)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z4V8_9BACT
acetolactate synthase, small subunit Tax=GWA2_Rokubacteria_70_23_curated
ilvH; acetolactate synthase 3 regulatory subunit
13_1_20cm_2_scaffold_414_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19219..19992
DNA (774bp) protein (258aa)
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RBG_16_Acidobacteria_70_10_curated
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI81_CHLTF
13_1_20cm_2_scaffold_414_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(19974..21011)
DNA (1038bp) protein (346aa)
Radical SAM domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F180_ACIC5
Predicted Fe-S oxidoreductase {ECO:0000313|EMBL:CDM64964.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
radical SAM domain-containing protein
13_1_20cm_2_scaffold_414_17
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21167..22618
DNA (1452bp) protein (484aa)
PAS domain S-box n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TN11_9CYAN
PAS domain S-box {ECO:0000313|EMBL:AFY83773.1}; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata
PAS domain-containing protein
13_1_20cm_2_scaffold_414_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22628..24196)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UR5_SOLUE
Tfp pilus assembly protein PilF {ECO:0000313|EMBL:CDM66633.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_2_scaffold_414_19
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24226..25695)
DNA (1470bp) protein (490aa)
Putative Zn-dependent peptidase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FZ89_ECHVK rbh
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Zn-dependent peptidase
13_1_20cm_2_scaffold_414_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25692..26987)
DNA (1296bp) protein (432aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TW36_MARTH
putative peptidase M16 family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_20cm_2_scaffold_414_21
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(26966..27832)
DNA (867bp) protein (289aa)
Beta-lactamase domain protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEN1_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:BAL54617.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
beta-lactamase domain-containing protein
13_1_20cm_2_scaffold_414_22
GWA1_OD1_47_6, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(27883..30831)
DNA (2949bp) protein (983aa)
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KKU75842.1}; Flags: Fragment;; TaxID=1619003 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA1_47_6.;"
Cell surface receptor IPT/TIG domain protein alias=gwe2_scaffold_601_22 id=2109052 tax=GWE2_OD1_ACD81_47_12 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi
cell surface receptor IPT/TIG domain-containing protein
13_1_20cm_2_scaffold_414_23
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31210..31608)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWX4_9EURY
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
13_1_20cm_2_scaffold_414_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(31702..33813)
DNA (2112bp) protein (704aa)
Putative metal-dependent phosphohydrolase n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NME4_9BACT
diguanylate cyclase and metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative metal-dependent phosphohydrolase
13_1_20cm_2_scaffold_414_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(33978..35435)
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363601F rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_2_scaffold_414_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(35558..36031)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFZ9_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_414_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(36096..38816)
DNA (2721bp) protein (907aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
AMP-dependent synthetase and ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMP1_KORVE
AMP-dependent synthetase/ligase
13_1_20cm_2_scaffold_414_28
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38836..40140)
DNA (1305bp) protein (435aa)
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y093_PEDHD
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
RagB/SusD domain-containing protein
Displaying 28 items

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