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13_1_20cm_2_scaffold_516

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_516_trna_1
unknown

Not on your lists

comp(2..75)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_516_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(179..1339)
DNA (1161bp) protein (387aa)
Peptidase M48, Ste24p n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021Y2_SOLUE
peptidase M48, Ste24p Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
peptidase M48, Ste24p
13_1_20cm_2_scaffold_516_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1514..2233)
DNA (720bp) protein (240aa)
GlcNAc-PI de-N-acetylase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2F7FF
LmbE family protein {ECO:0000313|EMBL:ABJ85764.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (s
LmbE family protein
13_1_20cm_2_scaffold_516_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2212..2481)
DNA (270bp) protein (90aa)
Thioredoxin n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V0G8_HALMA
glutaredoxin Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
trxA8; thioredoxin
13_1_20cm_2_scaffold_516_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2490..3482)
DNA (993bp) protein (331aa)
FMN adenylyltransferase/riboflavin kinase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
FMN adenylyltransferase/riboflavin kinase (EC:2.7.1.26 2.7.7.2)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BCF97
13_1_20cm_2_scaffold_516_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

3516..4352
DNA (837bp) protein (279aa)
MazG family protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPL4_KORVE
nucleotide pyrophosphohydrolase; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
nucleotide pyrophosphohydrolase
13_1_20cm_2_scaffold_516_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4349..5065
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360DC44
N-acetyltransferase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
N-acetyltransferase
13_1_20cm_2_scaffold_516_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5046..6155
DNA (1110bp) protein (370aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_01933}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_01933};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_01933};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
O-succinylbenzoate synthase (EC:4.2.1.-)
O-succinylbenzoate synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027H6_SOLUE
13_1_20cm_2_scaffold_516_8
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

6152..7525
DNA (1374bp) protein (458aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AEP11329.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidoba
cytosine deaminase
13_1_20cm_2_scaffold_516_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(7606..8091)
DNA (486bp) protein (162aa)
3,4-dihydroxy-2-butanone-4-phosphate synthase n=1 Tax=Lactobacillus gastricus PS3 RepID=H4GJP6_9LACO
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculu
3,4-dihydroxy-2-butanone 4-phosphate synthase
13_1_20cm_2_scaffold_516_10
unknown

Not on your lists

8305..8679
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_2_scaffold_516_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8796..9488
DNA (693bp) protein (231aa)
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFU7_9BACT
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
13_1_20cm_2_scaffold_516_12

Not on your lists

comp(9562..11049)
DNA (1488bp) protein (496aa)
Glycine decarboxylase (Subunit 2) (Glycine cleavage system protein P) {ECO:0000313|EMBL:CBI08960.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CBI08960.1};; TaxID=410659 species="unclassified sequences; metagenome
Glycine decarboxylase (Subunit 2) (Glycine cleavage system protein P) n=1 Tax=mine drainage metagenome RepID=E6QNY9_9ZZZZ
glycine dehydrogenase subunit 2
13_1_20cm_2_scaffold_516_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11046..12404)
DNA (1359bp) protein (453aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000255|HAMAP-Rule:MF_00712}; EC=1.4.4.2 {ECO:0000255|HAMAP-Rule:MF_00712};; Glycine cleavage system P-protein subunit 1 {ECO:0000255|HA
Probable glycine dehydrogenase (decarboxylating) subunit 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GCSPA_KORVE
glycine dehydrogenase subunit 1
13_1_20cm_2_scaffold_516_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12418..12801)
DNA (384bp) protein (128aa)
Glycine cleavage system H protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=GCSH_RUBXD
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.
glycine cleavage system protein H
13_1_20cm_2_scaffold_516_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12880..13902)
DNA (1023bp) protein (341aa)
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10) Tax=CSP1_5_NC10
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA8_9BACT
13_1_20cm_2_scaffold_516_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14027..15847
DNA (1821bp) protein (607aa)
Long-chain acyl-CoA synthetase (EC:6.2.1.3); K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037B32BA
AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_516_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16020..17798
DNA (1779bp) protein (593aa)
M38 (Beta-aspartyl dipeptidase) family protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NW59_9DELT
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
M38 (Beta-aspartyl dipeptidase) family protein
13_1_20cm_2_scaffold_516_18
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17798..18778
DNA (981bp) protein (327aa)
Glyoxylate reductase / Hydroxypyruvate reductase {ECO:0000313|EMBL:CCU79837.1}; EC=1.1.1.26 {ECO:0000313|EMBL:CCU79837.1};; EC=1.1.1.81 {ECO:0000313|EMBL:CCU79837.1};; TaxID=1293054 species="Bacteria;
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
Glyoxylate reductase / Hydroxypyruvate reductase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1P3_9FIRM
13_1_20cm_2_scaffold_516_19
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

18870..19796
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LII8_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP11886.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_2_scaffold_516_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19803..21206
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6D1_ACIC5
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
13_1_20cm_2_scaffold_516_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21203..21610
DNA (408bp) protein (136aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM66391.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_2_scaffold_516_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21617..22807
DNA (1191bp) protein (397aa)
Alanyl-tRNA synthetase n=2 Tax=Lysinibacillus fusiformis RepID=D7X013_9BACI
threonyl/alanyl tRNA synthetase SAD; K07050 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
alaS2; alanyl-tRNA synthetase
13_1_20cm_2_scaffold_516_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22998..24068)
DNA (1071bp) protein (357aa)
NHL repeat containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UV1_SOLUE
NHL repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
NHL repeat-containing protein
Displaying 24 items

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