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13_1_20cm_2_scaffold_6485

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6485_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_20cm_2_scaffold_6485_2
R_SM2F11_46_14, SM2F11, Bacteria

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539..1303
DNA (765bp) protein (255aa)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
13_1_20cm_2_scaffold_6485_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

1287..2261
DNA (975bp) protein (325aa)
spore coat protein n=1 Tax=Bacillus subtilis RepID=UPI0003072CE4
N-acetyltransferase GCN5 Tax=RBG_16_Euryarchaeota_68_13_curated
pseG; pseudaminic acid biosynthesis-associated protein PseG
13_1_20cm_2_scaffold_6485_4
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

2222..3268
DNA (1047bp) protein (349aa)
N-acetylneuraminate synthase (EC:2.5.1.56); K01654 N-acetylneuraminate synthase [EC:2.5.1.56] Tax=RBG_13_RIF03_48_7_curated
N-acetylneuraminate synthase (EC:2.5.1.56)
Pseudaminic acid synthase n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J9V8_9FIRM
13_1_20cm_2_scaffold_6485_5
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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3265..4293
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZYZ6_MAHA5
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_20cm_2_scaffold_6485_6
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4313..4519
DNA (207bp) protein (69aa)
Flagellar FlbD family protein n=2 Tax=Thermoanaerobacter RepID=D3T2N7_THEIA
Flagellar FlbD family protein {ECO:0000313|EMBL:ADD02489.1}; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Ther
flagellar FlbD family protein
13_1_20cm_2_scaffold_6485_7
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4510..5310
DNA (801bp) protein (267aa)
flagellar motor protein MotA n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B7AEF0
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADW68454.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strai
MotA/TolQ/ExbB proton channel
13_1_20cm_2_scaffold_6485_8
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5310..6113
DNA (804bp) protein (268aa)
OmpA/MotB domain protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E7J2_GEOSM
OmpA/MotB domain protein {ECO:0000313|EMBL:ACT19852.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (str
OmpA/MotB domain-containing protein
13_1_20cm_2_scaffold_6485_9
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6268..6819)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NT79_CHRVO
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ60848.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
hypothetical protein
13_1_20cm_2_scaffold_6485_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6849..7898)
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AA4_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_6485_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8012..10864)
DNA (2853bp) protein (951aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037B31CB rbh
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
glpC; D-lactate dehydrogenase (cytochrome)
13_1_20cm_2_scaffold_6485_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10985..11185)
DNA (201bp) protein (67aa)
30S ribosomal protein S21 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS21_KORVE
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
30S ribosomal protein S21
13_1_20cm_2_scaffold_6485_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11412..11873
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
13_1_20cm_2_scaffold_6485_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11880..12905
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B66BB6
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:CDM65824.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide heptosyltransferase
13_1_20cm_2_scaffold_6485_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(12877..13176)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035ED8D0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_6485_16
unknown

Not on your lists

13337..13585
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_2_scaffold_6485_17

Not on your lists

13585..14157
DNA (573bp) protein (191aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021G1_SOLUE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AIA10580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_2_scaffold_6485_18
unknown

Not on your lists

14284..14895
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_20cm_2_scaffold_6485_19
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15092..15580
DNA (489bp) protein (163aa)
SARP family transcriptional regulator n=1 Tax=Streptomyces acidiscabies RepID=UPI000289D50C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96721.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
Displaying 19 items

View Taxonomy