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13_1_20cm_2_scaffold_675

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_675_1
unknown

Not on your lists

comp(3..137)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_2_scaffold_675_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(241..1281)
DNA (1041bp) protein (347aa)
DNA uptake lipoprotein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVM2_KORVE
DNA uptake lipoprotein-like protein; K05807 putative lipoprotein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
DNA uptake lipoprotein-like protein
13_1_20cm_2_scaffold_675_3
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1303..1986)
DNA (684bp) protein (228aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;
Ribulose-phosphate 3-epimerase n=2 Tax=Geobacillus RepID=A4IM53_GEOTN
rpe; ribulose-phosphate 3-epimerase
13_1_20cm_2_scaffold_675_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1983..2747)
DNA (765bp) protein (255aa)
PASTA domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIS0_KORVE
PASTA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
protein PASTA domain-containing protein
13_1_20cm_2_scaffold_675_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2751..3752)
DNA (1002bp) protein (334aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
methionyl-tRNA formyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003619B16
methionyl-tRNA formyltransferase
13_1_20cm_2_scaffold_675_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3764..4243)
DNA (480bp) protein (160aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
formylmethionine deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCK1_9BACT
13_1_20cm_2_scaffold_675_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4323..5495)
DNA (1173bp) protein (391aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ6_CHLTF rbh
13_1_20cm_2_scaffold_675_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

5538..6308
DNA (771bp) protein (257aa)
transporter n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035CFFD9
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
transporter
13_1_20cm_2_scaffold_675_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6305..7102
DNA (798bp) protein (266aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF05_CHLTF
ABC-type transport system involved in resistance to organic solvents, ATPase component {ECO:0000313|EMBL:CDM66175.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrino
resistance to organic solvents ABC transporter ATPase
13_1_20cm_2_scaffold_675_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7153..8250
DNA (1098bp) protein (366aa)
Mammalian cell entry related domain protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X0I0_ACISM
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:CDM66174.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; P
hypothetical protein
13_1_20cm_2_scaffold_675_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8260..8739
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375767D
GreA/GreB family elongation factor {ECO:0000313|EMBL:ABF39557.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
GreA/GreB family elongation factor
13_1_20cm_2_scaffold_675_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8732..9352
DNA (621bp) protein (207aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
CDP-alcohol phosphatidyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RT8_SOLUE
CDP-alcohol phosphatidyltransferase
13_1_20cm_2_scaffold_675_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9342..10055)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q0E1_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_20cm_2_scaffold_675_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(10065..10391)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX9_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:AEP11479.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
hypothetical protein
13_1_20cm_2_scaffold_675_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10410..11150)
DNA (741bp) protein (247aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT27_KORVE
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDM64961.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
ABC transporter ATPase
13_1_20cm_2_scaffold_675_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(11188..12288)
DNA (1101bp) protein (367aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU86_KORVE
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
efflux ABC transporter inner membrane protein
13_1_20cm_2_scaffold_675_17
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12303..13172)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU87_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
13_1_20cm_2_scaffold_675_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13169..13708)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8A0_ACIC5
membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_2_scaffold_675_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14301..15716
DNA (1416bp) protein (472aa)
glutamine synthetase n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI000367E96D
glnA; glutamine synthetase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
glnA; glutamine synthetase
13_1_20cm_2_scaffold_675_20
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(15766..18060)
DNA (2295bp) protein (765aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RBG_16_Nitrospirae_43_11_curated
Putative Glutamate-ammonia ligase adenylyltransferase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YW79_9BACT
glutamate-ammonia-ligase adenylyltransferase
Displaying 20 items

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