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13_1_20cm_2_scaffold_792

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_792_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

188..646
DNA (459bp) protein (153aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_20cm_2_scaffold_792_2
unknown

Not on your lists

873..1412
DNA (540bp) protein (180aa)

This feature has no annotations

13_1_20cm_2_scaffold_792_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1492..1893)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003616E5B
Uncharacterized protein {ECO:0000313|EMBL:KCZ71044.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
hypothetical protein
13_1_20cm_2_scaffold_792_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2018..3400)
DNA (1383bp) protein (461aa)
Putative short-chain fatty acids transporter n=1 Tax=Bacillus methanolicus MGA3 RepID=I3ECQ2_BACMT
short chain fatty acid transporter; K02106 short-chain fatty acids transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
short chain fatty acid transporter
13_1_20cm_2_scaffold_792_5
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..4245)
DNA (861bp) protein (287aa)
Cupin domain-containing protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A6Q6_9PROT
Cupin domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
13_1_20cm_2_scaffold_792_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..5620)
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00037B5824
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACA16427.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Me
major facilitator superfamily transporter
13_1_20cm_2_scaffold_792_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5610..6296)
DNA (687bp) protein (229aa)
Asp/Glu/hydantoin racemase; K01799 maleate isomerase [EC:5.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
maiA; Maleate isomerase (EC:5.2.1.1)
Maleate isomerase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTC3_SPHAL
13_1_20cm_2_scaffold_792_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6478..7341
DNA (864bp) protein (288aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_792_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7437..7838
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEQ9_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
13_1_20cm_2_scaffold_792_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7795..8601
DNA (807bp) protein (269aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
13_1_20cm_2_scaffold_792_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8661..9350)
DNA (690bp) protein (230aa)
Membrane protein containing DUF165 n=2 Tax=mine drainage metagenome RepID=T1D2W2_9ZZZZ
hypothetical protein; K09125 hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_20cm_2_scaffold_792_12
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9305..9928)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5R0_9BACT
Zn-dependent protease Tax=GWA2_Deltaproteobacteria_55_10_curated
peptidase M50
13_1_20cm_2_scaffold_792_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10054..12738)
DNA (2685bp) protein (895aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0F017_9BACT
13_1_20cm_2_scaffold_792_14
Aquimarina agarilytica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12828..13262)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Aquimarina agarilytica RepID=UPI0002893FF4
13_1_20cm_2_scaffold_792_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..14424)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L405_THERP
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
13_1_20cm_2_scaffold_792_16
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(14433..15959)
DNA (1527bp) protein (509aa)
radical SAM protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4AB8C
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
hypothetical protein
13_1_20cm_2_scaffold_792_17
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16243..16764
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T4U3_THEA1
yrdA; putative transferase Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
hypothetical protein
13_1_20cm_2_scaffold_792_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


16761..17996
DNA (1236bp) protein (412aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=SYH_SOLUE
13_1_20cm_2_scaffold_792_19
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


17996..19759
DNA (1764bp) protein (588aa)
Aspartate--tRNA ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ABG1_THEID
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEH44472.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermo
aspartyl-tRNA synthetase
13_1_20cm_2_scaffold_792_20
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(19779..20492)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZEQ8_9GAMM
Uncharacterized protein Tax=RBG_13_Aminicenantes_62_12_curated
13_1_20cm_2_scaffold_792_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20974..21543
DNA (570bp) protein (190aa)
DNA mismatch repair protein MutL n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MUTL_KORVE
DNA mismatch repair protein MutL {ECO:0000255|HAMAP-Rule:MF_00149}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
DNA mismatch repair protein MutL
13_1_20cm_2_scaffold_792_22
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

21730..22026
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FZX3_9BACT
nucleoid DNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
transcriptional dual regulator HU-beta
13_1_20cm_2_scaffold_792_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(22448..22669)
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
13_1_20cm_2_scaffold_792_24
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23068..24078
DNA (1011bp) protein (337aa)
add; adenosine deaminase (Adenosine aminohydrolase) (EC:3.5.4.4) Tax=CG_Delta_01
add; adenosine deaminase (EC:3.5.4.4)
adenine deaminase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289F3BE
13_1_20cm_2_scaffold_792_25
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24082..26064)
DNA (1983bp) protein (661aa)
glycosyl transferase n=1 Tax=Gordonia polyisoprenivorans RepID=UPI000380579F
Putative glycosyl transferase {ECO:0000313|EMBL:AFA74655.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain D
putative glycosyl transferase
13_1_20cm_2_scaffold_792_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26439..27698)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=234267 specie
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho
13_1_20cm_2_scaffold_792_27
Lactobacillus brevis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27746..28141)
DNA (396bp) protein (132aa)
Probable GTP-binding protein EngB n=3 Tax=Lactobacillus brevis RepID=ENGB_LACBA
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1001583 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacill
probable GTP-binding protein EngB
13_1_20cm_2_scaffold_792_28
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(28481..30898)
DNA (2418bp) protein (806aa)
Lon-A peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Lon protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRE0_KORVE
Lon-A peptidase
13_1_20cm_2_scaffold_792_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(30932..32191)
DNA (1260bp) protein (420aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJR5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
clpX; ATP-dependent protease ATP-binding subunit ClpX
Displaying 29 items

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