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13_1_20cm_2_scaffold_838

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_838_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(1..1389)
DNA (1389bp) protein (463aa)
Nodulation efficiency protein NfeD n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R2_SOLUE
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
nodulation efficiency protein NfeD
13_1_20cm_2_scaffold_838_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1394..2749)
DNA (1356bp) protein (452aa)
Conserved domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6D7_ACIC5
TPR repeat-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_2_scaffold_838_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2804..3982
DNA (1179bp) protein (393aa)
Glycosyl transferase, group 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS83_KORVE
glycosyl transferase, group 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
group 1 glycosyl transferase
13_1_20cm_2_scaffold_838_4
unknown

Not on your lists

comp(3939..4535)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_2_scaffold_838_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4554..5012)
DNA (459bp) protein (153aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WLK9_GEOS8
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:ADW13689.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp
Mov34/MPN/PAD-1 family protein
13_1_20cm_2_scaffold_838_6
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5199..6221)
DNA (1023bp) protein (341aa)
Adenylate/Guanylate Cyclase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN51_9GAMM
chemotaxis protein CheY Tax=RBG_16_Betaproteobacteria_64_18_curated
adenylate/guanylate cyclase
13_1_20cm_2_scaffold_838_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6326..7399)
DNA (1074bp) protein (358aa)
Cell division protein FtsZ n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFJ4_CHLTF
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomo
cell division protein FtsZ
13_1_20cm_2_scaffold_838_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7428..8660)
DNA (1233bp) protein (411aa)
Cell division protein ftsA n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D0T5_MYXXD
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ftsA; cell division protein FtsA
13_1_20cm_2_scaffold_838_9
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8633..9418)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037DDBDD
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="
cell division septal protein
13_1_20cm_2_scaffold_838_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9415..10794)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00046}; EC=6.3.2.8 {ECO:0000255|HAMAP-Rule:MF_00046};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000255|HAMAP-Rule:MF_00046}; Ta
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MURC_SOLUE
13_1_20cm_2_scaffold_838_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10959..12035)
DNA (1077bp) protein (359aa)
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylgluco
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=MURG_GEOBB rbh
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
13_1_20cm_2_scaffold_838_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12057..13148)
DNA (1092bp) protein (364aa)
Cell cycle protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG9_KORVE
cell cycle protein; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cell cycle protein
13_1_20cm_2_scaffold_838_13
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(13150..14298)
DNA (1149bp) protein (383aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=MRAY_KORVE
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
13_1_20cm_2_scaffold_838_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14308..15747)
DNA (1440bp) protein (480aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035E5D60
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
13_1_20cm_2_scaffold_838_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15722..17191)
DNA (1470bp) protein (490aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000255|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000255|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000255|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=MURE_SOLUE
13_1_20cm_2_scaffold_838_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17202..19262)
DNA (2061bp) protein (687aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Peptidoglycan synthetase FtsI n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG4_KORVE
peptidoglycan glycosyltransferase
13_1_20cm_2_scaffold_838_17

Not on your lists

comp(19282..19701)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QKP2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI07812.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cell division protein FtsL
13_1_20cm_2_scaffold_838_18
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19701..20570)
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
16S rRNA methyltransferase n=1 Tax=Mastigocladopsis repens RepID=UPI00030823FA
mraW; S-adenosyl-methyltransferase MraW
13_1_20cm_2_scaffold_838_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20586..21026)
DNA (441bp) protein (147aa)
Protein MraZ n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=MRAZ_ACIC5
putative MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
MraZ protein
13_1_20cm_2_scaffold_838_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

21250..22317
DNA (1068bp) protein (356aa)
Ribosome-binding ATPase YchF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILQ1_KORVE
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
ychF; GTP-dependent nucleic acid-binding protein EngD
13_1_20cm_2_scaffold_838_21
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

22314..23045
DNA (732bp) protein (244aa)
Zinc/iron transporter Tax=RBG_16_Zixibacteria_40_9_curated
Zinc/iron transporter alias=RBG1_1352,RBG1_C00001G01352 id=1250910 tax=RBG1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown
Zinc/iron transporter
13_1_20cm_2_scaffold_838_22
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(23047..23460)
DNA (414bp) protein (138aa)
Transcriptional regulators, TraR/DksA family n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ60_9BACT
transcriptional regulators, TraR/DksA family Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
transcriptional regulators, TraR/DksA family
Displaying 22 items

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