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13_1_20cm_2_scaffold_9449

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_9449_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
2-oxoglutarate dehydrogenase E2 component {ECO:0000313|EMBL:ABF43350.1}; EC=2.3.1.61 {ECO:0000313|EMBL:ABF43350.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000368E426
2-oxoglutarate dehydrogenase E2
13_1_20cm_2_scaffold_9449_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(262..1236)
DNA (975bp) protein (325aa)
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:ABJ81365.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABJ81365.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
13_1_20cm_2_scaffold_9449_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1300..2349)
DNA (1050bp) protein (350aa)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ABJ81364.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ABJ81364.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soli
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C52_SOLUE
13_1_20cm_2_scaffold_9449_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2464..2883)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0002FF82DF
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_20cm_2_scaffold_9449_5
unknown

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2927..3388
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_2_scaffold_9449_trna_2
unknown

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comp(3401..3473)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_9449_6
unknown

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comp(3628..3798)
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_2_scaffold_9449_7
unknown

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3977..4099
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_20cm_2_scaffold_9449_8
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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comp(4231..5286)
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_16_Planctomycetes_43_13_curated
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9V3_ACIC5
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_20cm_2_scaffold_9449_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5286..7142)
DNA (1857bp) protein (619aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P28_SOLUE
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABJ88592.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Sol
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
13_1_20cm_2_scaffold_9449_trna_1
unknown

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comp(7378..7451)
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_9449_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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7593..8468
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023Y6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_2_scaffold_9449_11

Not on your lists

comp(8545..9324)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium FPPP_13C3 RepID=S4W4H2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AGO87987.1}; TaxID=1343845 species="Bacteria; environmental samples.;" source="uncultured bacterium FPPP_13C3.;"
hypothetical protein
13_1_20cm_2_scaffold_9449_12
unknown

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9668..10003
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_2_scaffold_9449_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10105..10488
DNA (384bp) protein (128aa)
Nucleic acid binding, OB-fold, tRNA/helicase-type n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RV1_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65953.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nucleic acid binding, OB-fold, tRNA/helicase-type
13_1_20cm_2_scaffold_9449_14
unknown

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10946..11155
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_2_scaffold_9449_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11127..11708
DNA (582bp) protein (194aa)
FeS assembly SUF system protein SufT n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGQ0_9BACT
FeS assembly SUF system protein SufT {ECO:0000313|EMBL:EEF61101.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
hypothetical protein
13_1_20cm_2_scaffold_9449_16
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

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12010..12420
DNA (411bp) protein (137aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J8U8_NOSP7
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ACC82586.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / P
PAS/PAC sensor hybrid histidine kinase
13_1_20cm_2_scaffold_9449_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12524..13756)
DNA (1233bp) protein (411aa)
Integral membrane protein MviN n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028N0_SOLUE
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
integral membrane protein MviN
Displaying 19 items

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