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13_1_20cm_2_scaffold_874_18

Organism: 13_1_20CM_2_Acidobacteria_55_15

near complete RP 44 / 55 BSCG 46 / 51 ASCG 14 / 38
Location: comp(19184..20602)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 467.0
  • Bit_score: 386
  • Evalue 2.90e-104
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 471.0
  • Bit_score: 400
  • Evalue 3.70e-108
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 467.0
  • Bit_score: 386
  • Evalue 8.40e-105

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Taxonomy

RIFOXYD1_FULL_Bdellovibrionales_55_31_curated → Bdellovibrionaceae → Bdellovibrionales → Bdellovibrio → Bacteria

Sequences

DNA sequence
Length: 1419
ATGAGCCCAAAACCCAAGATTCTGGTCGTCGACGACGATCGGTCGATCTGCAAGTTGATGGGATCCATTCTCGAGATGGAATCCTATCCGTTTCGCGTGGCCATGACGGCGGAACAAGCCCGGCGTGCCATGGAGGAGGAACGCTTCGACATTCTCGTCAGCGATATCTACCTCGGCGATGATTCCGGTCTCCACCTGCTGGAACGCATGAAATGCGTCAACGCGGATGCAGAGGTCGTCATCATGACGGCACACGGATCGATGGAGACCGCCGTTCATGCCGTGCACAACGGCGCATTCGATTACATCAGCAAACCCTTCGTGGTCGATGAAATGCTGCGGATTCTCCACCGCATCGAAGAGAAATTCCAACTATCGCGATCGAAGACCGTCGGTCCGGAGCTGGCTGAGAATCTTCCAAAAACAGAAATCATCGGCGCAACCCCCAAAATGGTCGACATATATAAAAAAGTTGCGAAGACCGCGCGGATCGAAGCACCCGTACTCGTGATCGGCGAGAGCGGATCCGGGAAGGAACTCATCGCCCGGGCACTCCATGAAAATAGCGCGCGGACGAAAGCTCCTTTTGTGGTGATCAACTGCGGGGCGCTGCCGGAAACGCTCCTGGAGAGCGAACTGTATGGGCACGAGCGCGGCTCCTTCACCGGCGCGACGGGGTCTCGGAAGGGATTGTTCGAAAGCGCTGCGGGAGGCACTGTCTTTCTCGACGAAATTTCGGAAACCTCATTGAGTTTCCAAGTGAAGCTGCTGCGCGTTATACAAGAACGGGAAATTCGCCGGGTCGGTTCCAACGACACGATCCAAGTCGACGTGCGCTTAATCGCCGCAACGAATCGGGACTTGAGAGAGATGGTGCGGACCGGCCAATTCCGCGAGGACTTGTTCCACCGGCTCAACGTTTTTACTATTGCCTTGCCTCCGCTGCGGGACCGCAGGGAAGATATCCCGCTGCTCTCCAGTTTCTTCCTCAAACTGTTCACGGAAAAGAACGGCAAAACCGTTCGGTTAGCGGAGGACGCATTAGAGGCGATGAAGCAATACTCCTGGCCCGGTAACGTCCGGGAACTGAAAAATACGCTTGAGCGCGCCATGACCTTTAATGACACTGGCGTCGTCCAATTGGAGGAGCTGGAGTTCGGAGAAGCCGAGGATAGTGCCCTGATTGAACCCTCATCGGCGCCTTCACTTGATGCTGCGCCCTATCGGGCTAGCGCTTCGCGGGCGCGGTCTTTCCCGGGCGGAGAGGCGTCGTTGGATGCGATGGAAAGGGAACACATCATCAAGATCTTGAAGCAAACCGGCGGCAATAAGAAGAAGGCCGCAGAGATTCTGGGCATTGAAAGACGAACGCTTTATAACAAGGCGAGACGGCTCGGAATTGATTTTCGAAGTATTTGA
PROTEIN sequence
Length: 473
MSPKPKILVVDDDRSICKLMGSILEMESYPFRVAMTAEQARRAMEEERFDILVSDIYLGDDSGLHLLERMKCVNADAEVVIMTAHGSMETAVHAVHNGAFDYISKPFVVDEMLRILHRIEEKFQLSRSKTVGPELAENLPKTEIIGATPKMVDIYKKVAKTARIEAPVLVIGESGSGKELIARALHENSARTKAPFVVINCGALPETLLESELYGHERGSFTGATGSRKGLFESAAGGTVFLDEISETSLSFQVKLLRVIQEREIRRVGSNDTIQVDVRLIAATNRDLREMVRTGQFREDLFHRLNVFTIALPPLRDRREDIPLLSSFFLKLFTEKNGKTVRLAEDALEAMKQYSWPGNVRELKNTLERAMTFNDTGVVQLEELEFGEAEDSALIEPSSAPSLDAAPYRASASRARSFPGGEASLDAMEREHIIKILKQTGGNKKKAAEILGIERRTLYNKARRLGIDFRSI*