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13_1_20cm_2_scaffold_874

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_874_1
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists


comp(3..926)
DNA (924bp) protein (308aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Aminicenantes_63_16_curated
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B75333
13_1_20cm_2_scaffold_874_2
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(976..2205)
DNA (1230bp) protein (410aa)
UPF0272 protein Mahau_1643 n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZJ8_MAHA5 rbh
UPF0272 protein EL26_23840 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
13_1_20cm_2_scaffold_874_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2245..4179
DNA (1935bp) protein (645aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
arginyl-tRNA synthetase (EC:6.1.1.19)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360B9EF
13_1_20cm_2_scaffold_874_4
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4209..5366)
DNA (1158bp) protein (386aa)
FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1] Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
FAD dependent oxidoreductase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI74_ROSCS rbh
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_874_5
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5429..5869
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQP8_9PLAN
hypothetical protein; K09122 hypothetical protein Tax=GWC2_Deltaproteobacteria_42_11_curated
hypothetical protein
13_1_20cm_2_scaffold_874_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5879..8209)
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D4849
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
TonB-dependent receptor
13_1_20cm_2_scaffold_874_7
unknown

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8239..8598
DNA (360bp) protein (120aa)

This feature has no annotations

13_1_20cm_2_scaffold_874_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8437..9909)
DNA (1473bp) protein (491aa)
aldehyde Dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Aldehyde dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG58_9BACT
aldehyde dehydrogenase
13_1_20cm_2_scaffold_874_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9902..10543)
DNA (642bp) protein (214aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae
HAD family hydrolase (EC:3.1.3.18)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV9_SOLUE
13_1_20cm_2_scaffold_874_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10601..11365)
DNA (765bp) protein (255aa)
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0B4_TERSS
ABC-type transport system involved in resistance to organic solvents, ATPase component Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ABC transporter-like protein
13_1_20cm_2_scaffold_874_11
Cloacibacillus evryensis, Cloacibacillus, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

11391..12938
DNA (1548bp) protein (516aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PVJ6_9BACT
Amino acid ABC transporter membrane protein, PAAT family {ECO:0000313|EMBL:EXG78618.1}; Flags: Precursor;; TaxID=866499 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Cl
polar amino acid ABC transporter inner membrane subunit
13_1_20cm_2_scaffold_874_12
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(12800..14329)
DNA (1530bp) protein (510aa)
GAF domain/GGDEF domain protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQT7_STIAD
diguanylate cyclase with GAF sensor Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
GAF domain/GGDEF domain-containing protein
13_1_20cm_2_scaffold_874_13
Geobacillus sp. WSUCF1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14363..15271
DNA (909bp) protein (303aa)
Fumarylpyruvate hydrolase {ECO:0000313|EMBL:EPR30131.1}; EC=3.7.1.5 {ECO:0000313|EMBL:EPR30131.1};; TaxID=886559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source=
ureidoglycolate lyase (EC:4.3.2.3)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00031CC8F0
13_1_20cm_2_scaffold_874_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15243..16661)
DNA (1419bp) protein (473aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL60_ROSCS
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_20cm_2_scaffold_874_15
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16793..17650)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AF78_GEOSK
hypothetical protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
hypothetical protein
13_1_20cm_2_scaffold_874_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17710..18474)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NN4_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ88736.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_2_scaffold_874_17
unknown

Not on your lists

comp(18471..19061)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_2_scaffold_874_18
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19184..20602)
DNA (1419bp) protein (473aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
sigma-54 dependent DNA-binding response regulator
13_1_20cm_2_scaffold_874_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20647..22929)
DNA (2283bp) protein (761aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; C
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUH1_KORVE
sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_874_20
unknown

Not on your lists

23108..23512
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_2_scaffold_874_21
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

23534..23929
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037B473A
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
hypothetical protein
13_1_20cm_2_scaffold_874_22
RLO_PLX_64_10, Bacteria

Not on your lists

23934..24182
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YV97_DACSA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
13_1_20cm_2_scaffold_874_23
unknown

Not on your lists

comp(24389..24889)
DNA (501bp) protein (167aa)

This feature has no annotations

13_1_20cm_2_scaffold_874_trna_1
unknown

Not on your lists

24861..24933
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_874_24
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(24964..25353)
DNA (390bp) protein (130aa)
CHP02436-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUZ5_9BACT
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
13_1_20cm_2_scaffold_874_25
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

25453..26388
DNA (936bp) protein (312aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
(2Fe-2S)-binding domain-containing protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGF2_THEM7
(2Fe-2S)-binding domain-containing protein
13_1_20cm_2_scaffold_874_26
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

26536..29046
DNA (2511bp) protein (837aa)
molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQG5_9BACT
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
13_1_20cm_2_scaffold_874_27
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

29052..30044
DNA (993bp) protein (331aa)
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF4_9BACT
coxM; putative aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_20cm_2_scaffold_874_28
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(30275..31087)
DNA (813bp) protein (271aa)
suhB; extragenic suppressor protein SuhB; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI000373EAEF
13_1_20cm_2_scaffold_874_29
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(31134..32306)
DNA (1173bp) protein (391aa)
putative aminotransferase (EC:2.6.1.-); K14155 cystathione beta-lyase [EC:4.4.1.8] Tax=RBG_16_Chloroflexi_57_11_curated
putative aminotransferase (EC:2.6.1.-)
Putative aminotransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5E4_ANATU rbh
Displaying 30 items

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