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13_1_20cm_2_scaffold_10294

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_10294_1
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1810
DNA (1809bp) protein (603aa)
TonB-dependent receptor, plug n=1 Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1SA56_SHEAM
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABM01263.1}; Flags: Precursor;; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" sour
TonB-dependent receptor, plug
13_1_20cm_2_scaffold_10294_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2786..3328
DNA (543bp) protein (181aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UL26_9LEPT
13_1_20cm_2_scaffold_10294_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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3389..3949
DNA (561bp) protein (187aa)
RNA polymerase subunit sigma-24 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B55C41
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Armatimonadetes_67_12_curated
sigma-70 family RNA polymerase sigma factor
13_1_20cm_2_scaffold_10294_4
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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3946..4617
DNA (672bp) protein (224aa)
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
13_1_20cm_2_scaffold_10294_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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4642..5241
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML74_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBE69916.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
hypothetical protein
13_1_20cm_2_scaffold_10294_6
Selenomonas flueggei, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5241..5663
DNA (423bp) protein (141aa)
UPF0102 protein HMPREF0908_0682 n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2D8_9FIRM
UPF0102 protein HMPREF0908_0682 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=638302 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas flueg
hypothetical protein
13_1_20cm_2_scaffold_10294_trna_1
unknown

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5721..5792
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_10294_trna_2
unknown

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5914..5991
DNA (78bp)
transferRNA
13_1_20cm_2_scaffold_10294_7
unknown

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6059..6595
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_20cm_2_scaffold_10294_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6618..7391)
DNA (774bp) protein (258aa)
Putative 4-aminobutyrate aminotransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4J7_ANATU
4-aminobutyrate aminotransferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
putative 4-aminobutyrate aminotransferase
13_1_20cm_2_scaffold_10294_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(7405..7920)
DNA (516bp) protein (172aa)
4-aminobutyrate aminotransferase (EC:2.6.1.19); K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
4-aminobutyrate aminotransferase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003705FCC
4-aminobutyrate aminotransferase
13_1_20cm_2_scaffold_10294_10
unknown

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comp(7991..8173)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 12 items

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