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13_1_20cm_2_scaffold_1422

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1422_1
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

3..182
DNA (180bp) protein (60aa)
Outer membrane efflux protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J795_ANAD2
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
outer membrane efflux protein
13_1_20cm_2_scaffold_1422_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179..1339
DNA (1161bp) protein (387aa)
Efflux pump, RND family, membrane fusion lipoprotein n=2 Tax=Geobacter metallireducens RepID=Q39V42_GEOMG
Efflux pump, RND family, membrane fusion lipoprotein {ECO:0000313|EMBL:ABB31882.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
RND family efflux pump membrane fusion lipoprotein
13_1_20cm_2_scaffold_1422_3
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1336..4485
DNA (3150bp) protein (1050aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G432_GEOUR
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein
13_1_20cm_2_scaffold_1422_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(4492..5079)
DNA (588bp) protein (196aa)
Putative GTPase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI80_CHLTF
Putative GTPase {ECO:0000313|EMBL:AEP11538.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
putative GTPase
13_1_20cm_2_scaffold_1422_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5107..5601)
DNA (495bp) protein (165aa)
Roadblock/LC7 family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AT68_PELPD
Roadblock/LC7 family protein Tax=RBG_16_Acidobacteria_70_10_curated
roadblock/LC7 family protein
13_1_20cm_2_scaffold_1422_6
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(5735..6145)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000361FB51
hypothetical protein Tax=RBG_16_Planctomycetes_43_13_curated
13_1_20cm_2_scaffold_1422_7
unknown

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comp(6183..6479)
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_2_scaffold_1422_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6576..7580)
DNA (1005bp) protein (335aa)
arcB; ectoine utilization protein EutC (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
ocd2; ectoine utilization protein EutC (EC:4.3.1.12)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036A41CC
13_1_20cm_2_scaffold_1422_9
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

7753..8967
DNA (1215bp) protein (405aa)
putative aminotransferase (EC:2.6.1.-) Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N96_SOLUE
13_1_20cm_2_scaffold_1422_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8930..10294)
DNA (1365bp) protein (455aa)
polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polynucleotide adenylyltransferase n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F20
polynucleotide adenylyltransferase
13_1_20cm_2_scaffold_1422_11
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

10420..11136
DNA (717bp) protein (239aa)
ABC-type nitrate/sulfonate/bicarbonate transport system protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QQR3_PERMH
nitrate/sulfonate/bicarbonate ABC transporter; K02051 NitT/TauT family transport system substrate-binding protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
nitrate/sulfonate/bicarbonate ABC transporter
13_1_20cm_2_scaffold_1422_12
unknown

Not on your lists

11133..11393
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_2_scaffold_1422_13
RLO_PLX_64_10, Bacteria

Not on your lists

11450..13801
DNA (2352bp) protein (784aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEM4_DESB2
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_1422_14
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

14185..15276
DNA (1092bp) protein (364aa)
Protein involved in meta-pathway of phenol degradation n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N853_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_1_20cm_2_scaffold_1422_15
unknown

Not on your lists

15376..15762
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_2_scaffold_1422_16
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15922..17664
DNA (1743bp) protein (581aa)
Sensory box histidine kinase/response regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYE5_9DELT
ATPase ATP-binding domain-containing protein Tax=GWD2_Desulfuromonadales_61_12_curated
sensor histidine kinase/response regulator
13_1_20cm_2_scaffold_1422_17
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17679..19073
DNA (1395bp) protein (465aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X5H7_DESRD
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACV69674.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfoha
two component, sigma54 specific, transcriptional regulator, Fis family
13_1_20cm_2_scaffold_1422_18
unknown

Not on your lists

19085..19351
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 18 items

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