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13_1_20cm_2_scaffold_1433

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1433_1
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..759)
DNA (759bp) protein (253aa)
Shikimate 5-dehydrogenase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R261_PIRSD
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00179162}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua
shikimate 5-dehydrogenase
13_1_20cm_2_scaffold_1433_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(780..1703)
DNA (924bp) protein (308aa)
cysteine synthase; K12339 cysteine synthase B [EC:2.5.1.47] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine synthase n=1 Tax=Thermincola potens (strain JR) RepID=D5X7I3_THEPJ
13_1_20cm_2_scaffold_1433_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1766..4219)
DNA (2454bp) protein (818aa)
Spermidine synthase-like protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G1Z2_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64640.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
13_1_20cm_2_scaffold_1433_4
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

4466..5455
DNA (990bp) protein (330aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] alias=RBG1_89,RBG1_C00001G00089 id=1249647 tax=RBG1 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes rbh
selenide, water dikinase
13_1_20cm_2_scaffold_1433_5
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5536..6282)
DNA (747bp) protein (249aa)
Methyltransferase family protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L7M7_9CYAN
methyltransferase
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_2_scaffold_1433_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6314..8848)
DNA (2535bp) protein (845aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=454194 species="Bacteria; A
Replication restart DNA helicase PriA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B75_SOLUE
replication restart DNA helicase PriA
13_1_20cm_2_scaffold_1433_7
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8845..9720)
DNA (876bp) protein (292aa)
uracil-DNA glycosylase; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK16_ANASK
phage SPO1 DNA polymerase-like protein
13_1_20cm_2_scaffold_1433_8
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9717..10238)
DNA (522bp) protein (174aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EKP93741.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EKP93741.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EKP93741.1};; Tax
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBJ9_9FIRM
13_1_20cm_2_scaffold_1433_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10356..11015)
DNA (660bp) protein (220aa)
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI00036FF119
Tax=BJP_08E140C01_Xanthomonadales_64_42
13_1_20cm_2_scaffold_1433_10
unknown

Not on your lists

comp(10999..11271)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_20cm_2_scaffold_1433_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11427..12716)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P4G0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36371.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
putative Glycosyl transferase, family 2; putative Dolichyl-phosphate beta-D-mannosyltransferase
13_1_20cm_2_scaffold_1433_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13007..13972)
DNA (966bp) protein (322aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=2 Tax=Geobacter sulfurreducens RepID=D7AFV4_GEOSK rbh
fcl; GDP-L-fucose synthase
13_1_20cm_2_scaffold_1433_13
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13986..15086)
DNA (1101bp) protein (367aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=CG_Delta_01
GDP-mannose 4,6-dehydratase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q4A8_9DELT rbh
gmd; GDP-mannose 4,6-dehydratase
13_1_20cm_2_scaffold_1433_14
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(15115..15777)
DNA (663bp) protein (221aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T436_THEA1
13_1_20cm_2_scaffold_1433_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15835..16710)
DNA (876bp) protein (292aa)
UPF0701 protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MNJ7_CLOTM
TIGR00255 family protein {ECO:0000313|EMBL:CDM66227.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_2_scaffold_1433_16
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16775..18037)
DNA (1263bp) protein (421aa)
Lipid-A-disaccharide synthase {ECO:0000255|HAMAP-Rule:MF_00392}; EC=2.4.1.182 {ECO:0000255|HAMAP-Rule:MF_00392};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadale
Lipid-A-disaccharide synthase n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=LPXB_GEOMG
lpxB; lipid-A-disaccharide synthase
13_1_20cm_2_scaffold_1433_17
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18034..18462)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG22_9BACT
hypothetical protein Tax=CG_Desulfob_01
hypothetical protein
13_1_20cm_2_scaffold_1433_18
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19196..20392
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00037E621C
id=4814993 Tax=GWC2_Deltaproteobacteria_65_14_curated
13_1_20cm_2_scaffold_1433_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20623..21609
DNA (987bp) protein (329aa)
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:AEN73727.1}; EC=4.1.1.35 {ECO:0000313|EMBL:AEN73727.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
UDP-glucuronate decarboxylase (EC:4.1.1.35)
UDP-glucuronate decarboxylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW9_RHOMR
13_1_20cm_2_scaffold_1433_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21617..22348)
DNA (732bp) protein (244aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPW1_9RHIZ
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIM26003.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvir
type 11 methyltransferase
13_1_20cm_2_scaffold_1433_21
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(22368..24524)
DNA (2157bp) protein (719aa)
capsular exopolysaccharide family protein (EC:2.7.10.2) Tax=RBG_13_OP8X_37_8_curated
capsular exopolysaccharide family protein (EC:2.7.10.2)
Capsular exopolysaccharide family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NHY0_DESAR
13_1_20cm_2_scaffold_1433_22
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(24581..25735)
DNA (1155bp) protein (385aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI0003786FA9
gumA; protein GumA; K01991 polysaccharide export outer membrane protein Tax=RBG_13_OP8X_37_8_curated
gumA; protein GumA
13_1_20cm_2_scaffold_1433_23
unknown

Not on your lists

comp(25756..27171)
DNA (1416bp) protein (472aa)

This feature has no annotations

13_1_20cm_2_scaffold_1433_24
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(27207..28007)
DNA (801bp) protein (267aa)
polysaccharide biosynthesis protein CapD Tax=RIFOXYC12_FULL_TA06_54_24_curated
Polysaccharide biosynthesis protein CapD alias=gwe2_scaffold_54_149 id=2081048 tax=TA06 species=Mahella australiensis 50-1 BON genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
polysaccharide biosynthesis family protein
Displaying 24 items

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