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13_1_20cm_2_scaffold_1774

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1774_1
unknown

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comp(1..204)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_2_scaffold_1774_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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429..1241
DNA (813bp) protein (271aa)
formate dehydrogenase accessory protein FdhD n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF26A
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivisio
formate dehydrogenase family accessory protein FdhD
13_1_20cm_2_scaffold_1774_3

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1305..2498
DNA (1194bp) protein (398aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAK2_GEMAT
hydroxymethylbutenyl pyrophosphate reductase
13_1_20cm_2_scaffold_1774_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2557..3249)
DNA (693bp) protein (231aa)
Putative Peptidase S16, lon-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAN4_9BACT alias=16ft_combo_ws3_scaffold_2287_32 id=5224508 tax=16ft_combo_ws3 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae
putative peptidase; K07157 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ATP-dependent protease La
13_1_20cm_2_scaffold_1774_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3386..3766
DNA (381bp) protein (127aa)
Ferredoxin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIE9_CHLTF
ferredoxin Tax=GWA2_Rokubacteria_70_23_curated
ferredoxin
13_1_20cm_2_scaffold_1774_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3776..4783
DNA (1008bp) protein (336aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DQH2_DESVM
multi-sensor signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_65_10_curated
13_1_20cm_2_scaffold_1774_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4981..6879
DNA (1899bp) protein (633aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=2 Tax=uncultured candidate division OP1 bacterium RepID=H5SS75_9BACT
13_1_20cm_2_scaffold_1774_8
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6880..7257)
DNA (378bp) protein (126aa)
Amino acid-binding ACT domain protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5T4_METTP
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ABK14058.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methano
amino acid-binding ACT domain-containing protein
13_1_20cm_2_scaffold_1774_9
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

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comp(7262..7918)
DNA (657bp) protein (219aa)
Succinate dehydrogenase subunit B n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF66_9BACT
putative succinate dehydrogenase, iron-sulfur subunit Tax=GWA2_WOR_2_53_43_curated
succinate dehydrogenase and fumarate reductase iron-sulfur protein
13_1_20cm_2_scaffold_1774_10
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7995..9527)
DNA (1533bp) protein (511aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] alias=RBG1_453,RBG1_C00001G00453 id=1250011 tax=RBG1 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
fumarate reductase/succinate dehydrogenase flavoprotein domain protein
13_1_20cm_2_scaffold_1774_11
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

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comp(9473..9760)
DNA (288bp) protein (96aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWA2_WOR_2_53_43_curated
succinate dehydrogenase (ubiquinone) (EC:1.3.5.1)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000375887B
13_1_20cm_2_scaffold_1774_12
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9763..10587)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B0D7A
integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
putative integral membrane protein
13_1_20cm_2_scaffold_1774_13
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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10844..12259
DNA (1416bp) protein (472aa)
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Ribonuclease, Rne/Rng family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF29_DESAR rbh
ribonuclease, Rne/Rng family
Displaying 13 items

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