ggKbase home page

13_1_20cm_2_scaffold_2821

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2821_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(98..286)
DNA (189bp) protein (63aa)
GCN5-related N-acetyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHF4_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EEF60789.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
hypothetical protein
13_1_20cm_2_scaffold_2821_2

Not on your lists

comp(283..852)
DNA (570bp) protein (190aa)
Marine sediment metagenome DNA, contig: S06H3_L06367 {ECO:0000313|EMBL:GAI02293.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_20cm_2_scaffold_2821_3
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1133..2392)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVT4_KORVE
hypothetical protein Tax=RBG_13_Planctomycetes_60_9_curated
hypothetical protein
13_1_20cm_2_scaffold_2821_4
unknown

Not on your lists

2550..3017
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_2_scaffold_2821_5
unknown

Not on your lists

3213..3827
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_20cm_2_scaffold_2821_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3841..4263
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA86493.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
13_1_20cm_2_scaffold_2821_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4269..4643
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA86493.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
13_1_20cm_2_scaffold_2821_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..4960)
DNA (285bp) protein (95aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Arsenate reductase related protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024V9_SOLUE
arsenate reductase
13_1_20cm_2_scaffold_2821_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5129..8506)
DNA (3378bp) protein (1126aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Multi-sensor hybrid histidine kinase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L655_FRASN
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_2821_10
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8538..9218
DNA (681bp) protein (227aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372A4F7
thiamine-phosphate pyrophosphorylase
13_1_20cm_2_scaffold_2821_11

Not on your lists

9215..10006
DNA (792bp) protein (264aa)
Phosphomethylpyrimidine kinase n=1 Tax=uncultured prokaryote RepID=H5SLW4_9ZZZZ
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:BAL57150.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
phosphomethylpyrimidine kinase
13_1_20cm_2_scaffold_2821_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10262..12316
DNA (2055bp) protein (685aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEH0_ANAD2
Amino acid transporter-like protein {ECO:0000313|EMBL:ACL64296.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
amino acid transporter-like protein
13_1_20cm_2_scaffold_2821_13
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12313..12663
DNA (351bp) protein (117aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=591001 species="Bacteria; Firmicutes; Negativ
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RN45_ACIFV
Displaying 13 items

View Taxonomy