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13_1_20cm_2_scaffold_1200

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1200_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1..1371)
DNA (1371bp) protein (457aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCM0_9BACT rbh
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CBK40979.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira
sigma-54 dependent DNA-binding response regulator
13_1_20cm_2_scaffold_1200_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1471..3762)
DNA (2292bp) protein (764aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK40978.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae;
sensor histidine kinase (EC:2.7.13.3)
Sensor histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL9_9BACT rbh
13_1_20cm_2_scaffold_1200_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3762..4979)
DNA (1218bp) protein (406aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0X7_GEODF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5119..5352)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_5
unknown

Not on your lists

comp(5583..5729)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_2_scaffold_1200_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6167..7036
DNA (870bp) protein (290aa)
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL7_9BACT rbh
mazG; nucleoside triphosphate pyrophosphohydrolase; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
mazG; nucleoside triphosphate pyrophosphohydrolase
13_1_20cm_2_scaffold_1200_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7059..7676
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7968..8375)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_9
Thermus sp. RL, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8372..8977)
DNA (606bp) protein (202aa)
Transferase/hydrolase n=1 Tax=Thermus sp. RL RepID=H7GDN5_9DEIN
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=456163 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. RL.;"
rhodanese-like protein
13_1_20cm_2_scaffold_1200_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9049..10512)
DNA (1464bp) protein (488aa)
hemY; protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemY; protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL4_9BACT
13_1_20cm_2_scaffold_1200_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10522..11274)
DNA (753bp) protein (251aa)
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL3_9BACT rbh
13_1_20cm_2_scaffold_1200_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11514..12539)
DNA (1026bp) protein (342aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT rbh
13_1_20cm_2_scaffold_1200_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12616..13086)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13053..13970)
DNA (918bp) protein (306aa)
Putative Transporter, eamA family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK9_9BACT
putative transporter Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative transporter
13_1_20cm_2_scaffold_1200_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13974..14177)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40967.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_1200_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14252..14449)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14609..14935
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15061..15888
DNA (828bp) protein (276aa)
Putative Phosphate-binding protein PstS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK5_9BACT rbh
putative phosphate-binding protein PstS; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative phosphate-binding protein PstS
13_1_20cm_2_scaffold_1200_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15920..16393
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1200_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16655..18076
DNA (1422bp) protein (474aa)
pycA; pyruvate carboxylase subunit A (EC:6.4.1.1); K01959 pyruvate carboxylase subunit A [EC:6.4.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pycA; pyruvate carboxylase subunit A (EC:6.4.1.1)
Pyruvate carboxylase, subunit A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK3_9BACT
13_1_20cm_2_scaffold_1200_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18198..20099
DNA (1902bp) protein (634aa)
pycB; pyruvate carboxylase subunit B (EC:6.4.1.1); K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pycB; pyruvate carboxylase subunit B (EC:6.4.1.1)
Pyruvate carboxylase, subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK2_9BACT rbh
13_1_20cm_2_scaffold_1200_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20122..21039
DNA (918bp) protein (306aa)
putative 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase (EC:3.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase (EC:3.7.1.-)
Putative 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK1_9BACT rbh
13_1_20cm_2_scaffold_1200_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

21116..21787
DNA (672bp) protein (224aa)
Putative Thiol peroxidase (Modular protein) {ECO:0000313|EMBL:CBK40959.1}; EC=1.11.1.- {ECO:0000313|EMBL:CBK40959.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitro
putative thiol peroxidase (EC:1.11.1.-)
Putative Thiol peroxidase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCK0_9BACT
13_1_20cm_2_scaffold_1200_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

21899..22171
DNA (273bp) protein (91aa)
sthA; soluble pyridine nucleotide transhydrogenase (EC:1.6.1.1); K00322 NAD(P) transhydrogenase [EC:1.6.1.1] Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI00035D7149
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
Displaying 24 items

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