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13_1_20cm_2_scaffold_3150

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3150_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(510..1841)
DNA (1332bp) protein (444aa)
Ammonium transporter Amt n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD01_9BACT
amtB; ammonium transporter amt; K03320 ammonium transporter, Amt family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
amtB; ammonium transporter amt
13_1_20cm_2_scaffold_3150_2
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1954..2517)
DNA (564bp) protein (188aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535};; Cyanate hydrolase {ECO:0000256|HAMAP-Rule:MF_005
Cyanate hydratase n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5Z3C7_MYCSD
cynS; cyanate lyase CynS
13_1_20cm_2_scaffold_3150_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2617..3075)
DNA (459bp) protein (153aa)
Cyanate hydratase {ECO:0000256|HAMAP-Rule:MF_00535, ECO:0000313|EMBL:CBK41115.1}; Short=Cyanase {ECO:0000256|HAMAP-Rule:MF_00535};; EC=4.2.1.104 {ECO:0000256|HAMAP-Rule:MF_00535, ECO:0000313|EMBL:CBK4
cynS; cyanate hydratase (EC:4.2.1.104)
Cyanate hydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD06_9BACT
13_1_20cm_2_scaffold_3150_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3116..3988)
DNA (873bp) protein (291aa)
Nitrate transport ATP-binding subunits C and D n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C051_DESTA rbh
nitrate transport ATP-binding subunits C and D Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nitrate transport ATP-binding subunits C and D
13_1_20cm_2_scaffold_3150_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3992..4888)
DNA (897bp) protein (299aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IXA4_9BACT rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nitrate ABC transporter permease
13_1_20cm_2_scaffold_3150_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5279..6298)
DNA (1020bp) protein (340aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C053_DESTA
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
13_1_20cm_2_scaffold_3150_7
R_NC10_66_22, NC10, Bacteria

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comp(6873..8135)
DNA (1263bp) protein (421aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z085_DESAT
Fis family transcriptional regulator; K02584 Nif-specific regulatory protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_3150_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8445..9854)
DNA (1410bp) protein (470aa)
glnA; glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD04_9BACT rbh
13_1_20cm_2_scaffold_3150_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9960..12668)
DNA (2709bp) protein (903aa)
putative (Protein-PII) uridylyltransferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative (Protein-PII) uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD03_9BACT rbh
13_1_20cm_2_scaffold_3150_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12665..13003)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD02_9BACT
Nitrogen regulatory protein PII {ECO:0000313|EMBL:CBK41111.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
glnB; nitrogen regulatory protein PII
13_1_20cm_2_scaffold_3150_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13094..14467)
DNA (1374bp) protein (458aa)
Ammonium transporter Amt n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD01_9BACT rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
amtB; ammonium transporter amt
Displaying 11 items

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