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13_1_20cm_2_scaffold_592

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_592_1

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comp(20..472)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7W0T6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72130.1}; TaxID=1256584 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;"
hypothetical protein
13_1_20cm_2_scaffold_592_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(776..1705)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_592_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1715..2482)
DNA (768bp) protein (256aa)
Putative Type IV pilus biogenesis/stability protein PilW n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF2_9BACT
Putative Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:CBK43039.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nit
putative type IV pilus biogenesis/stability protein PilW
13_1_20cm_2_scaffold_592_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2479..3393)
DNA (915bp) protein (305aa)
putative carbohydrate/purine kinase (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative carbohydrate/purine kinase (EC:2.7.1.-)
Ribokinase n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VWZ3_9BACT rbh
13_1_20cm_2_scaffold_592_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3459..4355)
DNA (897bp) protein (299aa)
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7W0U1_9BACT rbh
13_1_20cm_2_scaffold_592_6

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comp(4392..4601)
DNA (210bp) protein (70aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXG7_9BACT
13_1_20cm_2_scaffold_592_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4598..5380)
DNA (783bp) protein (261aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF5_9BACT rbh
13_1_20cm_2_scaffold_592_8

Not on your lists

comp(5442..7220)
DNA (1779bp) protein (593aa)
DNA mismatch repair protein MutL n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSQ3_9BACT rbh
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1256584 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;
mutL; DNA mismatch repair protein MutL
13_1_20cm_2_scaffold_592_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7598..8422)
DNA (825bp) protein (275aa)
Putative Tol-Pal system protein YbgF n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF7_9BACT
putative tol-Pal system protein YbgF Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative tol-Pal system protein YbgF
13_1_20cm_2_scaffold_592_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(8428..9726)
DNA (1299bp) protein (433aa)
Putative Tol-Pal system protein YbgF (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF8_9BACT
Putative Tol-Pal system protein YbgF (Modular protein) {ECO:0000313|EMBL:CBK43045.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitro
putative tol-Pal system protein YbgF
13_1_20cm_2_scaffold_592_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9766..10389)
DNA (624bp) protein (208aa)
Peptidoglycan-associated lipoprotein Pal (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIF9_9BACT
pal; peptidoglycan-associated lipoprotein pal; K03640 peptidoglycan-associated lipoprotein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pal; peptidoglycan-associated lipoprotein pal
13_1_20cm_2_scaffold_592_12

Not on your lists

comp(10472..11797)
DNA (1326bp) protein (442aa)
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH2_9BACT rbh
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins {ECO:0000313|EMBL:AGC72141.1}; TaxID=1256584 species="Bacteria; environmental samples.;" source="unculture
tolB; protein TolB
13_1_20cm_2_scaffold_592_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11794..12822)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSQ7_9BACT
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative protein TolA
13_1_20cm_2_scaffold_592_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12850..13302)
DNA (453bp) protein (151aa)
Protein TolR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG2_9BACT
tolR; protein TolR; K03560 biopolymer transport protein TolR Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolR; protein TolR
13_1_20cm_2_scaffold_592_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13299..14021)
DNA (723bp) protein (241aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VX00_9BACT
tolQ; protein TolQ; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tolQ; protein TolQ
13_1_20cm_2_scaffold_592_trna_2
unknown

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comp(14262..14337)
DNA (76bp)
transferRNA
13_1_20cm_2_scaffold_592_trna_1
unknown

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comp(14429..14501)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_592_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14600..15559)
DNA (960bp) protein (320aa)
Tyrosine recombinase XerD n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AN46_PELPD
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tyrosine recombinase XerD
13_1_20cm_2_scaffold_592_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15612..17675
DNA (2064bp) protein (688aa)
Putative Extracellular ligand-binding receptor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIG5_9BACT rbh
putative extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative extracellular ligand-binding receptor
13_1_20cm_2_scaffold_592_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17704..18606
DNA (903bp) protein (301aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSR2_9BACT rbh
Displaying 20 items

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