ggKbase home page

13_1_20cm_2_scaffold_2976_23

Organism: 13_1_20CM_2_Nitrospirae_62_14

partial RP 11 / 55 BSCG 10 / 51 ASCG 8 / 38
Location: comp(21512..22252)

Top 3 Functional Annotations

Value Algorithm Source
putative Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 246.0
  • Bit_score: 285
  • Evalue 5.20e-74
putative Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 248.0
  • Bit_score: 234
  • Evalue 3.60e-59
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDZ9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 248.0
  • Bit_score: 234
  • Evalue 1.30e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 741
ATGCCGGTCTTCTTCATCACCGCGGACCACGTCCAAGACGACACTGTGAGGATCGAGGGTCCTCTGCTCCATCATCTGCGGAGCAGTCTCCGTTGTCAGGTTGGGGAAGAGGTGTGGCTCGGGGACGACGCGAAGCAGCGGTACCGCATCCAGATCGTCGACATCAACCGTCGAGTGCTGAGCGGCCGAATCCTGGAAAGGCAACGCATGCCCTCTCCCACCGGTCCGACTCTCACCATCGGACAGGCCTTGCTGAAGGGAGAGCGCATGGATTGGGTGATCCAGAAGGCGTCCGAGCTGGGCGCCGCGTCACTCATTCCGCTTGTTTCACGCCAGGTCATCGCGAGGCCCCGGGCGGATCGTCTCGTGCCCCAGCAGCAACGCTGGCAGCGCATCGCGCTCGAGGCGGCACAGCAGGCCGAACGGTGGGAGGTGCCGGTGGTGCACACGACGTGCGAAGCCACCGAGTTCTTTGCCGGGCAGCCCGTCCACACGGTCGGCTTGATCCTGACTGAGCGTGGCGACGGGCGCAGCCTGGCCTCGGTCGCATTGCCGTCCGGCCCCGAGGGTCGTGTGGCGATCGCGGTGGGACCGGAGGGAGGCTGGACGAAGGAGGAACGAGGGAACGCCCTGCACTGCGGTTTTACGCCGGTCACGCTGGGGACGCGCATCCTGCGGGCCGAGACTGCGACAGTGGTGGCCCTGGCGATCCTGCAGAGCCGGCTCGGGGAACTGGGCTAG
PROTEIN sequence
Length: 247
MPVFFITADHVQDDTVRIEGPLLHHLRSSLRCQVGEEVWLGDDAKQRYRIQIVDINRRVLSGRILERQRMPSPTGPTLTIGQALLKGERMDWVIQKASELGAASLIPLVSRQVIARPRADRLVPQQQRWQRIALEAAQQAERWEVPVVHTTCEATEFFAGQPVHTVGLILTERGDGRSLASVALPSGPEGRVAIAVGPEGGWTKEERGNALHCGFTPVTLGTRILRAETATVVALAILQSRLGELG*