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13_1_20cm_2_scaffold_2976

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2976_trna_1
unknown

Not on your lists

comp(179..251)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_2976_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(392..805)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK42781.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_2976_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(893..2071)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP3_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2105..2317)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK42779.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_2976_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2398..3045)
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC34
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3199..3906)
DNA (708bp) protein (236aa)
Chlorite dismutase {ECO:0000313|EMBL:CBK42777.1}; EC=1.13.11.49 {ECO:0000313|EMBL:CBK42777.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candid
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35 rbh
13_1_20cm_2_scaffold_2976_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4117..4737
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK42776.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_2976_7
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(4721..5296)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44597.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
13_1_20cm_2_scaffold_2976_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5446..6006
DNA (561bp) protein (187aa)
CinA-like protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN8_9BACT
cinA; CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
cinA; CinA-like protein
13_1_20cm_2_scaffold_2976_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5973..6623
DNA (651bp) protein (217aa)
putative 2'-5' RNA ligase (EC:6.5.1.-); K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative 2'-5' RNA ligase (EC:6.5.1.-)
Putative 2'-5' RNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHN7_9BACT
13_1_20cm_2_scaffold_2976_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


6744..7853
DNA (1110bp) protein (370aa)
Protein RecA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDX9_9BACT rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=330214 species="Bacteria; Nitrospir
recA; recombinase recA
13_1_20cm_2_scaffold_2976_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7889..8401
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY0_9BACT
putative regulatory protein RecX; K03565 regulatory protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative regulatory protein RecX
13_1_20cm_2_scaffold_2976_12
unknown

Not on your lists

comp(9757..10212)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_2_scaffold_2976_13
unknown

Not on your lists

comp(10252..10734)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_2_scaffold_2976_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10998..11459
DNA (462bp) protein (154aa)
yqgF; putative holliday junction resolvase (EC:3.1.-.-); K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yqgF; putative holliday junction resolvase (EC:3.1.-.-)
Predicted Holliday junction resolvase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY2_9BACT
13_1_20cm_2_scaffold_2976_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11456..12532
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDY3_9BACT
hypothetical protein; K07082 UPF0755 protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12567..14993
DNA (2427bp) protein (809aa)
Putative uncharacterized protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDW5_9GAMM rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15106..16281
DNA (1176bp) protein (392aa)
phosphopentomutase (EC:5.4.2.7); K01839 phosphopentomutase [EC:5.4.2.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=DEOB_MOOTA rbh
13_1_20cm_2_scaffold_2976_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16317..16775
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDZ6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_19
unknown

Not on your lists

16813..17733
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_20cm_2_scaffold_2976_20
unknown

Not on your lists

17838..18734
DNA (897bp) protein (299aa)
hypothetical protein
13_1_20cm_2_scaffold_2976_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18786..20441
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDZ7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CBK41456.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_2976_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20455..21432
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PI40_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_2976_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21512..22252)
DNA (741bp) protein (247aa)
putative Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-); K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDZ9_9BACT
13_1_20cm_2_scaffold_2976_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22264..23373)
DNA (1110bp) protein (370aa)
Chaperone protein DnaJ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE00_9BACT rbh
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dnaJ; chaperone protein DnaJ
13_1_20cm_2_scaffold_2976_25
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(23444..25378)
DNA (1935bp) protein (645aa)
Chaperone protein DnaK n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE01_9BACT rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332, ECO:0000313|EMBL:CBK41460.1}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock
dnaK; chaperone protein DnaK
13_1_20cm_2_scaffold_2976_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(25408..25953)
DNA (546bp) protein (182aa)
Protein GrpE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE02_9BACT
grpE; chaperone protein GrpE; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
grpE; chaperone protein GrpE
Displaying 27 items

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