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13_1_40cm_3_scaffold_1186

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1186_1
unknown

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3..218
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_3_scaffold_1186_2
unknown

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310..477
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_1186_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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514..3453
DNA (2940bp) protein (980aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Formate dehydrogenase, alpha subunit n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PS75_KRIFD
formate dehydrogenase subunit alpha
13_1_40cm_3_scaffold_1186_4
unknown

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comp(3399..3767)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_3_scaffold_1186_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3976..4131
DNA (156bp) protein (52aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWC2_Rokubacteria_70_16_curated
dehydrogenase/reductase sdr family member 4 (EC:1.1.1.184)
Short-chain dehydrogenase/reductase SDR id=4638371 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_1186_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4168..5202
DNA (1035bp) protein (345aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=GWC2_Gemmatimonadetes_71_10_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT
Alcohol dehydrogenase GroES domain protein
13_1_40cm_3_scaffold_1186_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5199..6392
DNA (1194bp) protein (398aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
aminotransferase class I and II
13_1_40cm_3_scaffold_1186_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6392..8863
DNA (2472bp) protein (824aa)
Putative carboxypeptidase n=2 Tax=Singulisphaera acidiphila RepID=L0DNI9_SINAD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
carboxypeptidase
13_1_40cm_3_scaffold_1186_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8886..10040
DNA (1155bp) protein (385aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_1186_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10041..10607)
DNA (567bp) protein (189aa)
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RBG_16_Gemmatimonadetes_66_8_curated
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
13_1_40cm_3_scaffold_1186_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10625..12406)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A636_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
NYN domain, limkain-b1-type
13_1_40cm_3_scaffold_1186_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(12703..13245)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU5_GEMAT
DinB-like domain protein
DinB-like domain protein {ECO:0000313|EMBL:AHG88227.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1186_13
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13247..13594)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DJ87_METS0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP49381.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
13_1_40cm_3_scaffold_1186_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(13601..13948)
DNA (348bp) protein (116aa)
hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein id=14630371 bin=bin8_Chloro species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_3_scaffold_1186_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13945..14421)
DNA (477bp) protein (159aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88786.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1186_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14431..15561)
DNA (1131bp) protein (377aa)
Pyrrolo-quinoline quinone n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZMA0_OPITP
Pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AHG88419.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1186_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15584..16456)
DNA (873bp) protein (291aa)
Pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AHG88419.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PQQ-dependent enzyme id=3162891 bin=GWF2_Bacteroidetes_42_66 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
13_1_40cm_3_scaffold_1186_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(16457..17542)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F9451
oxidoreductase domain-containing protein Tax=RBG_16_Planctomycetes_55_9_curated
oxidoreductase domain protein
13_1_40cm_3_scaffold_1186_19
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

17649..18584
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036C1ED6 rbh
hypothetical protein Tax=CG_Arma_01
outermembrane protein
13_1_40cm_3_scaffold_1186_20
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(18588..19697)
DNA (1110bp) protein (370aa)
Putative glycoside hydrolase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQA9_9BACT
Putative glycoside hydrolase {ECO:0000313|EMBL:ELR71141.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7
glycosidase-like protein
Displaying 20 items

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