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13_1_40cm_3_scaffold_10960

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10960_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..999)
DNA (999bp) protein (333aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J7_GEMAT
13_1_40cm_3_scaffold_10960_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(996..1373)
DNA (378bp) protein (126aa)
single-stranded DNA-binding protein n=1 Tax=actinobacterium SCGC AAA027-J17 RepID=UPI00036CBCFE
smpB; SsrA-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SsrA-binding protein
13_1_40cm_3_scaffold_10960_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1566..2708)
DNA (1143bp) protein (381aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK99_CHLTF id=5224911 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UBA/THIF-type NAD/FAD binding domain-containing protein
13_1_40cm_3_scaffold_10960_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2705..3157)
DNA (453bp) protein (151aa)
Rrf2 family DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K0_GEMAT
transcriptional regulator, Rrf2 family
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:AHG91123.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_10960_5
unknown

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comp(3189..4223)
DNA (1035bp) protein (345aa)

This feature has no annotations

13_1_40cm_3_scaffold_10960_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4269..4685)
DNA (417bp) protein (139aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_10960_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4708..5382)
DNA (675bp) protein (225aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
13_1_40cm_3_scaffold_10960_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5339..6121)
DNA (783bp) protein (261aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aspartate ammonia-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K1_GEMAT
aspartate ammonia-lyase
13_1_40cm_3_scaffold_10960_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6136..7047)
DNA (912bp) protein (304aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEB4_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
13_1_40cm_3_scaffold_10960_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7114..7755)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Streptomyces somaliensis RepID=UPI00029AF7BB
beta-lactamase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_3_scaffold_10960_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7752..8717)
DNA (966bp) protein (322aa)
trxB1; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
thioredoxin reductase n=1 Tax=Sporolactobacillus vineae RepID=UPI000287D224
TrxB; thioredoxin reductase
13_1_40cm_3_scaffold_10960_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8710..9057)
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_10960_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9054..9650)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_3_scaffold_10960_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9752..10483)
DNA (732bp) protein (244aa)
short-chain dehydrogenase/reductase SDR; K03793 pteridine reductase [EC:1.5.1.33] Tax=GWC2_Gemmatimonadetes_71_10_curated
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR id=4412550 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_3_scaffold_10960_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10483..11205)
DNA (723bp) protein (241aa)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured gamma proteobacterium RepID=H5SE57_9GAMM
fabG10; 3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short-chain dehydrogenase/reductase SDR
13_1_40cm_3_scaffold_10960_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11195..11434)
DNA (240bp) protein (80aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peroxiredoxin
13_1_40cm_3_scaffold_10960_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11489..11632)
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_10960_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11607..12398)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K7_GEMAT
hypothetical protein; K07053 Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_10960_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12469..12738)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A956_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_10960_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12745..13059)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_40cm_3_scaffold_10960_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13062..13706)
DNA (645bp) protein (215aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
Putative dihydrolipoamide acetyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1FAF5_ACIC5
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_40cm_3_scaffold_10960_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13706..14401)
DNA (696bp) protein (232aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrolipoamide acyltransferase (EC:2.3.1.-)
Dihydrolipoamide acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
13_1_40cm_3_scaffold_10960_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14411..15340)
DNA (930bp) protein (310aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
Transketolase central region
13_1_40cm_3_scaffold_10960_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15340..16317)
DNA (978bp) protein (326aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
13_1_40cm_3_scaffold_10960_25
unknown

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16349..16417
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 25 items

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