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13_1_40cm_3_scaffold_1118

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1118_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..664
DNA (663bp) protein (221aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Polyribonucleotide nucleotidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PNP_GEMAT
Polyribonucleotide nucleotidyltransferase
13_1_40cm_3_scaffold_1118_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

666..1889
DNA (1224bp) protein (408aa)
Putative S16B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Y0_GEMAT
putative S16B family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M16 domain protein
13_1_40cm_3_scaffold_1118_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1886..2998
DNA (1113bp) protein (371aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alanine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X9_GEMAT
alanine dehydrogenase
13_1_40cm_3_scaffold_1118_4
unknown

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3008..3571
DNA (564bp) protein (188aa)

This feature has no annotations

13_1_40cm_3_scaffold_1118_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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3618..4097
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=3184992 bin=GWF2_Lentisphaerae_52_8 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein; K09924 hypothetical protein Tax=GWF2_Lentisphaerae_52_8_curated
hypothetical protein
13_1_40cm_3_scaffold_1118_6
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4097..4687
DNA (591bp) protein (197aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiof
Carbonic anhydrase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GS34_9GAMM
carbonic anhydrase
13_1_40cm_3_scaffold_1118_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4875..6122
DNA (1248bp) protein (416aa)
Eukaryotic-type DNA primase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWZ9_RAMTT
eukaryotic-type DNA primase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
eukaryotic-type DNA primase
13_1_40cm_3_scaffold_1118_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6082..7116)
DNA (1035bp) protein (345aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ATP-dependent DNA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX07_RAMTT
ATP-dependent DNA ligase
13_1_40cm_3_scaffold_1118_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7283..7813
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U4_GEMAT
protein of unknown function DUF305
Uncharacterized protein {ECO:0000313|EMBL:AHG88204.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1118_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7810..9822
DNA (2013bp) protein (671aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003692E5E
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1118_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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9865..11760
DNA (1896bp) protein (632aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Putative ABC transporter ATP-binding/permease protein id=5009185 bin=GWA2_Ignavibacteria_55_11 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
ABC transporter transmembrane region
13_1_40cm_3_scaffold_1118_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11757..13001
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FB91A
ankyrin
Ankyrin {ECO:0000313|EMBL:AEV98591.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620
13_1_40cm_3_scaffold_1118_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13062..13616
DNA (555bp) protein (185aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Putative uncharacterized protein id=4143928 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
13_1_40cm_3_scaffold_1118_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13585..14589)
DNA (1005bp) protein (335aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NG10_ROSCS
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:ABU56397.1}; Flags: Precursor;; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; R
protein kinase
13_1_40cm_3_scaffold_1118_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14901..15515
DNA (615bp) protein (205aa)
polysaccharide deacetylase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
polysaccharide deacetylase id=7201808 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
polysaccharide deacetylase
13_1_40cm_3_scaffold_1118_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15469..16644)
DNA (1176bp) protein (392aa)
Dehydrogenase flavoprotein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ial:IALB_0329 Dehydrogenase flavoprotein id=718002 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Dehydrogenase flavoprotein
13_1_40cm_3_scaffold_1118_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16637..16840)
DNA (204bp) protein (68aa)
ferredoxin n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039D880B
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_1118_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16986..18002
DNA (1017bp) protein (339aa)
Rod shape-determining protein MreB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X8_GEMAT
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_Gemmatimonadetes_66_8_curated
mreB; rod shape-determining protein MreB
13_1_40cm_3_scaffold_1118_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18007..18885
DNA (879bp) protein (293aa)
Rod shape-determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X7_GEMAT
rod shape-determining protein; K03570 rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein
13_1_40cm_3_scaffold_1118_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18882..19385
DNA (504bp) protein (168aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X6_GEMAT
hypothetical membrane protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rod shape-determining protein MreD
13_1_40cm_3_scaffold_1118_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19382..21277
DNA (1896bp) protein (632aa)
Penicillin-binding protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X5_GEMAT
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mrdA; penicillin-binding protein 2
13_1_40cm_3_scaffold_1118_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21249..22502
DNA (1254bp) protein (418aa)
Rod shape determining protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X4_GEMAT
mrdB; rod shape determining protein; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
mrdB; rod shape determining protein
13_1_40cm_3_scaffold_1118_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22671..23393
DNA (723bp) protein (241aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3X3_GEMAT
13_1_40cm_3_scaffold_1118_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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23480..24592
DNA (1113bp) protein (371aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0V6_SORCE
FolC bifunctional protein
13_1_40cm_3_scaffold_1118_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


24611..25813
DNA (1203bp) protein (401aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Histidyl-tRNA synthetase n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K1K4_9BACT
hisS; Histidyl-tRNA synthetase
13_1_40cm_3_scaffold_1118_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


25813..26487
DNA (675bp) protein (225aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Proline--tRNA ligase id=1966418 bin=GWB2_Elusimicrobium_63_22 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
proS; prolyl-tRNA synthetase
Displaying 26 items

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